KEGG T01683: VEJY3

Vibrio sp. EJY3: VEJY3_07070

Entry

VEJY3_07070 CDS T01683

Definition

DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

vej Vibrio sp. EJY3

Pathway

vej03410	Base excision repair
vej03420	Nucleotide excision repair
vej03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:vej03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:vej03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:vej03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

375265439

NCBI-GeneID:

11665824

UniProt:

H2IC24

Position

1:1586120..1586962

AA seq 280 aa
MPIKMTLIALAIMASTHVQAHPTVAPLVSLAETYQDGIDVSQYWYSEKLDGIRAYWTGQH
LVTRNGNRIHAPKWFTAPLPDYPLDGELWAGRGNFHLVQQTVLDKTPVDSAWKKVDFMLF
DMPYSAGDYRKRYYNIQNLVYELDEPHIKYVEHMTIQDEEHLFSQLDKIALADGEGVMLR
KVSSRYQAGRGSDLLKLKRFADTEAQVIGHKPGTGRLLGMMGAILVRMPDGTEFYIGSGF
TDELRRNPPQLGSIITFRYNGFTHNGKPKFARFLRERSKE

NT seq 843 nt +upstreamnt +downstreamnt
atgcccataaaaatgacattgatcgcactcgccattatggcatccacgcacgttcaagcc
catccaactgtcgcgcctttagtctcgctagcagaaacctatcaagatgggattgatgta
tcgcaatactggtacagtgaaaaattggatggtattcgtgcctactggacggggcaacac
cttgtaacacgtaatggaaaccggatacacgctcctaagtggtttacagcaccattgcca
gattaccctctggatggtgaactttgggccgggcgaggtaattttcatttggtccagcaa
acggttctggacaaaacaccggtcgacagcgcgtggaagaaagtagattttatgttgttt
gatatgccttactctgcgggtgactatcggaagcgctattacaatatccaaaacttggtg
tatgagctggacgagccacacattaagtacgtcgagcatatgactattcaagatgaagag
cacttatttagccaattagacaaaatcgcgttagctgatggggaaggtgtcatgttacgc
aaggtgtctagtcgttaccaagcgggccggggcagtgatttacttaagttaaaacgtttt
gccgatacagaagcacaagtgatcggacataagcctggaactggtcgcttgttgggaatg
atgggcgcgattctggttcgtatgcctgatggtacagagttttatattggtagtgggttt
acagacgagttgcgccggaacccaccacaattaggctcgattatcacatttaggtacaac
gggtttactcataacggaaaacctaaatttgccagatttttgcgtgagcgttctaaagag
tag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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