KEGG   Vibrio sp. EJY3: VEJY3_13200
Entry
VEJY3_13200       CDS       T01683                                 
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
  KO
K01770  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
Organism
vej  Vibrio sp. EJY3
Pathway
vej00900  Terpenoid backbone biosynthesis
vej01100  Metabolic pathways
vej01110  Biosynthesis of secondary metabolites
Module
vej_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:vej00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    VEJY3_13200 (ispF)
Enzymes [BR:vej01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.12  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
     VEJY3_13200 (ispF)
SSDB
Motif
Pfam: YgbB
Other DBs
NCBI-ProteinID: AEX23116
Position
1:complement(2948059..2948538)
AA seq 159 aa
MIRIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGR
HFPDTDDKWKGADSRELLKDVYRRVKEQGYRLGNADITIMAQAPKMAPHIEAMCAVIAQD
LETDISNINVKATTTERLGFTGRKEGIATEAVVLLFKQQ
NT seq 480 nt   +upstreamnt  +downstreamnt
atgattcgaattggtcacggttttgacgtacacaagtttggtggtgaaggcccagttatt
attggcggagtctctgttccttatgaacaagggcttatcgcacattcagatggcgatgtg
gccttacatgcgttgagcgatgcgttgcttggtgcaatcgcggctggtgatattggccgt
cactttccagatactgatgacaagtggaaaggtgctgatagccgtgagttactgaaagat
gtctaccgcagagtaaaagaacaaggttatcgattaggtaatgcagacattaccatcatg
gcacaagcgcctaaaatggcaccgcacatagaagcgatgtgcgcggtcattgctcaagac
cttgaaactgatatcagtaacataaacgttaaggcaaccacgacagaacgcctaggtttt
acaggacgtaaagaaggcatcgctacagaagctgttgttcttttgtttaagcaacaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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