KEGG   Vibrio antiquarius: VEA_001817Help
Entry
VEA_001817        CDS       T01107                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vex  Vibrio antiquarius
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vex00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VEA_001817
Enzymes [BR:vex01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VEA_001817
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VEA_001817
DNA repair and recombination proteins [BR:vex03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VEA_001817
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
1:complement(207108..207917)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRMGISPHMVGQTIQSFTFRTPKLRWDIPIELKKLEGQVIRAISRRAKYLL
IETNTGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLSSGKILRYNDPRRFGAWLWCAPG
ESHAVLANMGPEPLTEEFNAEYVAEKAKNKRVAVKQFIMDNKVVVGVGNIYANESLFKSR
IHPSRPAGKLTSQEWGGLVENIKMTLEIAITQGGTTLKDFAQADGKPGYFAQELLVYGKA
GEPCPECGERLQELKIGQRNTFFCSECQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttgccagaagttgaagtcagtcgtatggggattagcccccacatggttgga
caaacgatccagtcgtttacttttcgaacgcctaaattgcgctgggatattcctatagag
cttaaaaaattggaagggcaggtgatccgtgcgattagccgtcgcgcaaaatacttactg
atcgagacaaacacaggtacagccattgttcacttgggcatgtcggggtctttacgtgtc
ctagatgccgactttccgccagcaaagcacgatcatgtggatctcaaactaagcagtgga
aaaatactgcgttataacgatccgcgtcgttttggggcatggctgtggtgtgctcctggc
gagtcacatgctgtactagcaaacatggggcctgagcctttaactgaagagttcaatgcg
gaatatgtagcggagaaagctaaaaataagcgtgtcgccgtcaagcagttcatcatggac
aacaaagtcgtggttggtgtcgggaacatctacgcgaatgagtcgttgtttaaatctcga
attcacccttcaaggcctgcaggtaagctgacttctcaagagtgggggggacttgttgaa
aatatcaaaatgacacttgagattgccattacgcaaggtgggactacgctgaaagatttt
gcgcaagccgatggaaagccgggttactttgcacaagagttactagtttacggaaaagcc
ggagagccatgcccagagtgcggcgaacgacttcaagagctaaaaatagggcagcgtaat
accttcttttgtagtgagtgtcagaaataa

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