KEGG   Vibrio antiquarius: VEA_002019
Entry
VEA_002019        CDS       T01107                                 
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
vex  Vibrio antiquarius
Brite
KEGG Orthology (KO) [BR:vex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vex03016]
    VEA_002019
   03036 Chromosome and associated proteins [BR:vex03036]
    VEA_002019
Transfer RNA biogenesis [BR:vex03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    VEA_002019
 Prokaryotic type
    VEA_002019
Chromosome and associated proteins [BR:vex03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    VEA_002019
SSDB
Motif
Pfam: GIDA GIDA_C_1st GIDA_C FAD_oxidored FAD_binding_2 Pyr_redox_2 HI0933_like Thi4 Pyr_redox_3 DAO AlaDh_PNT_C NAD_binding_9 Pyr_redox
Other DBs
NCBI-ProteinID: ACY50182
Position
1:427917..429812
AA seq 631 aa
MLYHENFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNALENAPNLTL
FQQSVDDLIVEQDRAVGVVTQMGLRFHAKAVVLTVGTFLGGKIHIGMESSSGGRAGDPPS
IALADRLRELPFRVDRLKTGTPPRIDARTVDFSVLEAQHGDNPTPVFSFMGKREQHPRQI
PCFITHTNEQTHDVIRSNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPE
GLTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETK
FIHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTM
GTKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLIDNVRWARFNEKLNNMETERQRL
KSTWMNPKSEGVDELNKLLKTPMAREASGEDLLRRPEITYSQLTQLEAFAPALEDQQAAE
QVEIQVKYDGYIKRQQEEIEKSLRHENTKLPADLDYRDVKGLSNEVVAKLSEAKPESIGI
ASRISGITPAAISILLVHLKKHGLLKKGEEE
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgctttatcacgaaaactttgacgtcattgttgtcggtggcggacacgcaggaacggaa
gccgcgctcgcatctgcacgcacaggacaaaaaacgcttctccttacccataacatcgat
acattaggccagatgtcttgtaacccggcgattggtggtattggtaaaggtcacctagta
aaagaagtggatgctatgggcggtttgatggctgaagccatcgaccatgcaggtattcaa
ttccgtacactaaatgcctccaaaggtcctgcagttcgggcgactcgagctcaagcggat
cgtgctctgtacaaagcgtacgtccgtaacgcattagaaaatgcacctaacttaacgctg
ttccagcagtcagtggatgatctgattgttgagcaagaccgcgcggttggcgtggtgact
caaatgggacttcgcttccatgcgaaagccgtcgtactaacggtaggtacgttccttggt
ggtaagatccacattggcatggagagctcttcaggcggacgtgcaggggatccaccgtcg
atcgcattagcggatcgattacgtgagctgccattccgtgtggatcgtttaaaaacgggt
accccaccgcgcattgatgctcgcactgttgatttttcagtgcttgaagctcagcacggt
gataaccctacccctgtattttcattcatgggtaaacgcgaacaacacccgcgtcagatc
ccatgttttattacgcacaccaatgagcaaacgcacgacgtgatccgtagcaacttggat
cgcagtccgatgtacgcgggtgtgattgaaggcattggtccgcgttactgcccgtcgatt
gaagacaaagtgatgcgttttgcggataaaaatagccaccaaatcttcattgagccagaa
ggattaacgacgcacgagctataccctaacggtatctcgactagcttgccatttgatgtg
caagtacaaatcgttcgctcaatgaaaggttttgaaaatgcgcatatcgttcgtcctggt
tatgcgattgaatacgatttcttcgatccacgtgatttgaagcaaacgtacgaaaccaag
tttattcatggtctgttctttgctggtcagattaatggtacgactggctacgaagaagcc
gcagcgcaaggcttgatggccggtctaaacgcaagcttgtacagccaagacaaagaaggc
tggagcccacgtcgtgaccaagcttacatgggcgtattgattgatgatttatcgaccatg
ggtaccaaagaaccgtaccgcatgttcacttctcgtgcggaataccgcttgttgctacgt
gaagataacgccgatttacgtttaacggaaaaagcacgcgagttaggcttgattgacaat
gttcgttgggctcgctttaacgagaaactcaataacatggaaacggaacgtcagcgtttg
aaatcaacgtggatgaatccgaaatcagaaggcgttgatgagctgaacaagctgctgaaa
accccaatggcacgtgaagcgagtggtgaggatcttctgcgtcgtccagagatcacttat
tcgcaactgacgcaacttgaagcgtttgctcctgcacttgaagatcagcaagcggcggag
caagttgaaattcaagtaaaatacgatggttacatcaagcgtcagcaggaagagatcgaa
aaatcattgcgtcacgaaaataccaagctacccgcagatttggattaccgcgatgtaaaa
ggtttatcaaacgaagtcgttgctaaactgagtgaagccaaaccagagagcatcggtatt
gcatcgcgcatttctggtattacgcctgctgcaatttctattctacttgttcacttgaaa
aagcatggtttgctgaagaaaggtgaggaagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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