KEGG   Vitreoscilla filiformis: VITFI_CDS1912
Entry
VITFI_CDS1912     CDS       T04960                                 
Name
(GenBank) tRNA pseudouridine(55) synthase tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
vff  Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:vff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vff03016]
    VITFI_CDS1912
Enzymes [BR:vff01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     VITFI_CDS1912
Transfer RNA biogenesis [BR:vff03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VITFI_CDS1912
 Prokaryotic type
    VITFI_CDS1912
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: ASM77690
UniProt: A0A221KFU9
Position
1993582..1994601
AA seq 339 aa
MNPPDLDDDTPAAATPDVRAPRPRIVRRAVHGVLLLDKPLGLSSNDALQKVKRLFRAEKA
GHTGTLDPLATGLLPICFGAATKFSQASLEADKAYEATLRLGQRTVGGDREGEVIEEKPV
NVTPEQLQAACARFVGEIDQIPPMHSALKKDGKALYKYARAGVEVERPARRITIHSLDIL
SWDAEALHLRIAVRCTKGTYVRTLAEDIGAALGCGAHLAALQRTGSGRLRVAEALPLDQL
EAMSEAERDALLYSPDCMLHDWPQVVLPPAEAERFIAGMRRKVAQPDAPAVRVYGPNPAV
FLGSAHIEGGELIADRLLSPAEVQALMLNPRNARQAVIA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaatccgcccgacctcgacgacgacacccccgccgccgccacgcccgacgtgcgcgcc
ccgcgcccgcgcatcgtgcgccgtgctgtgcatggcgtgctgctgctggacaagccgctg
ggcctgtccagcaacgacgcactgcaaaaagtcaaacgcctgtttcgcgccgagaaagcc
ggccacaccggcacgcttgatcccctggccacgggcctgctgccgatttgttttggcgcg
gccaccaagttttcgcaagccagcctcgaagccgacaaagcctacgaagcgacgctgcgc
ctgggccagcgcaccgtgggcggcgaccgcgaaggcgaggtgatcgaagaaaagccggtg
aacgtcacgcccgagcaattgcaggccgcgtgtgcgcgctttgtgggggagatcgaccag
atcccgcccatgcattcggcactgaaaaaagacggcaaagcgctctacaaatacgcccgt
gcgggtgtggaggtggagcgtccggcgcggcgcatcaccattcacagccttgacatcctc
tcgtgggatgctgaggcgctgcatttgcgcatcgccgtgcgctgcaccaagggcacctat
gtgcgcaccttggcggaggacatcggcgccgcgctgggttgtggcgcgcacctggcggcc
ttgcagcgcacgggcagtggccggttgcgggtggccgaggcgctgccgctcgaccagctc
gaagccatgagcgaagccgagcgcgacgcgctgctgtattccccggactgcatgctgcac
gactggccccaagtcgtgctgcccccagccgaggccgagcgtttcatcgccggcatgcgc
cgcaaggtggcccagcccgacgccccagcggtgcgcgtgtatggcccgaatcctgctgtc
tttttaggcagcgcccacatcgaaggcggcgagctgatcgcagaccgcctgctcagccca
gccgaagtgcaggcgctgatgctgaatccccgaaacgcccgtcaggccgtgatcgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system