KEGG   Aliivibrio fischeri ES114: VF_0060
Entry
VF_0060           CDS       T00236                                 
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate decarboxylase
  KO
K03182  4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
Organism
vfi  Aliivibrio fischeri ES114
Pathway
vfi00130  Ubiquinone and other terpenoid-quinone biosynthesis
vfi01100  Metabolic pathways
vfi01110  Biosynthesis of secondary metabolites
vfi01240  Biosynthesis of cofactors
Module
vfi_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    VF_0060 (ubiD)
Enzymes [BR:vfi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.98  4-hydroxy-3-polyprenylbenzoate decarboxylase
     VF_0060 (ubiD)
SSDB
Motif
Pfam: UbiD UbiD_C UbiD_N Cyt-b5
Other DBs
NCBI-ProteinID: AAW84555
UniProt: Q5E8U1
Position
I:67471..69315
AA seq 614 aa
MQYKDLRDFIGHLEDIGQLKRISHPIDPHYEMTEISDRTLRAGGPALLFENPIGYDIPVL
TNLFGTPERVAIGMGRKDVLELREVGKLLAYLKEPEPPKGFKDALDKLPVFKQVLNMPTK
NIRKAACQQIVWQGDDVDLDKVPVMSCWADDVAPLLTWGLTITKGPHKKRQNLGIYRQQK
LSKNKVIMRWLAHRGGALDLRDWMETHPGEPFPVSVAFGADPATILGAVTPVPDTLSEYA
FAGLLRGSRTEITKSISNDLEVPASAEIVLEGYIDPTEFADEGPYGDHTGYYNEVEKHHV
FTVTHITMRKEPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIIDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVLVCDEEVNARDWSQVTAAMSQHMDP
ARDSLMIENTPIDSLDFASPVVGLGSKMGLDITKKWEVELALSPNVECSLTSSEQIEGCI
AEITKMCPEIIEIHLQNDNANMVVVSINKQAAGNAKKIMDAIWAQFEENKFVIVCDDDVN
VSDWNDIIWAVTTRMDPARDTLFLQSVGETSKMGLDATNKWEGECLREWGTPIKKDPEVV
AKIDSIWDELGIFK
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgcaatataaggatttacgtgattttatcggccatttggaagatattggtcagctaaaa
cgcatttcacaccccattgaccctcattatgaaatgacagagatcagcgatcgtacttta
cgtgcgggtggtcctgctttgctatttgaaaatccaattggctatgatattccggtttta
actaacttatttggtacgccagagcgtgtcgctatcggcatgggccgcaaagacgttttg
gaactgcgtgaagttggtaaattacttgcgtacttaaaagagcctgagccaccaaaaggc
tttaaagatgcattagataaattgccagtctttaagcaagttttgaacatgccaacgaag
aacattcgtaaagcggcatgccaacagattgtttggcaaggcgatgatgttgatcttgat
aaagttccagtgatgagctgttgggctgatgatgttgctccgttattaacgtggggtcta
accattaccaaaggcccgcataaaaaacgtcaaaacttaggtatttatcgtcagcagaag
ctaagtaaaaacaaagtgatcatgcgttggcttgctcaccgtggtggtgcattagattta
cgtgactggatggaaactcatccaggagaacctttccctgtctctgtggcgtttggtgct
gatcctgcaacgattttaggtgcggtaacgccagtacctgataccttatcggaatatgcg
tttgcaggccttctacgaggcagcagaaccgaaataaccaaatccattagtaatgacttg
gaagtaccagcaagtgctgagattgtcctagagggctatatcgacccaacagaatttgct
gatgaaggtccttatggggatcataccggttattacaatgaagttgaaaagcatcatgtg
tttacggtaacgcacattaccatgcgtaaagagccgatttatcacagtacgtatacgggc
cgtccacctgatgaacccgcggttttgggggtggcattaaacgaagtatttgtgccgatc
ttacaaaagcagtttcctgaaatcattgatttttatcttcctcctgaagggtgttcatac
cgcatggcggtagtgacaatgaagaaacaatacccaggacatgctaagcgtgtgatgatg
ggagtatggtcgttcttacgtcagtttatgtataccaagtttgtattggtctgcgatgaa
gaggtgaatgctcgagattggtcacaagtaacggcggcaatgtctcagcatatggatccg
gctcgtgacagtttgatgatagaaaatacgccgatagattcattagattttgcttcacct
gtggtgggattaggctcaaaaatgggcttagatatcacgaaaaaatgggaggtagaatta
gcattatcaccaaacgtggaatgttcattaacaagcagtgagcagattgaagggtgtatc
gctgaaataaccaaaatgtgtcctgagattattgaaattcatttgcagaatgacaatgcc
aatatggtggttgtatccatcaataaacaggcagcaggtaatgctaagaaaatcatggat
gccatttgggctcaatttgaagagaataaatttgttattgtgtgtgacgatgatgtcaat
gtgagtgattggaatgacatcatttgggcagtaacaacgcgaatggatccggcgagagat
actttattcttacaaagcgtaggtgaaacctcaaaaatggggttagatgccaccaataaa
tgggaaggtgaatgtcttcgtgagtggggaacacccatcaagaaagatccagaagtggtc
gctaaaattgactctatttgggatgaattaggtattttcaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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