KEGG   Aliivibrio fischeri ES114: VF_0130Help
Entry
VF_0130           CDS       T00236                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vfi  Aliivibrio fischeri ES114
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vfi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VF_0130 (mutM)
Enzymes [BR:vfi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VF_0130 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VF_0130 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:147021..147839
Genome map
AA seq 272 aa AA seqDB search
MPELPEVETSRLGITPHLQGQTIKAIVVRTDKLRWPIPQELQKLVGQRVQSIRRRAKYLM
IDTPKGSAIIHLGMSGSLRVLDEEVPSAKHDHVDLVLENGKVLRYNDPRKFGAWLYSEVG
VAHQVLSKLGPEPLTNEFNSEYFAEKAKNKKTVVKQFIMNNAVVVGVGNIYASESLFMAQ
IHPKTSVGSLKASQITLLVAEIKKVLETAIKQGGTTLKDFNQVDGKPGYFAQELHVYGRA
KKKCLLCSSIIQEEKIGQRNTFWCGHCQPFNK
NT seq 819 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattgccagaagtagaaaccagccgcctaggaatcacgccacatctgcaaggt
cagacaattaaagctattgtggttagaacggataagcttcgttggccaatccctcaagaa
ttgcaaaaattagttggacaaagagttcagtcaattcgccgtcgtgcaaaatatttaatg
atagataccccaaaaggcagtgcgattattcatttaggaatgtcgggcagtttacgagtt
ttagatgaagaagtgccgtcagcaaaacacgatcatgttgatctagtcttagaaaatggc
aaagttcttcgttataacgatccacgcaagtttggtgcttggttatattctgaggtaggt
gtagcgcatcaagtactttcgaagctagggccagaaccactaacaaatgaatttaatagc
gagtattttgcagagaaagccaagaataaaaaaaccgtagtgaaacaatttataatgaac
aatgctgtagtggttggtgttggtaatatttatgccagtgaatccttgtttatggctcaa
attcatcctaaaacgtcggtaggttcattaaaagcgtctcagattactcttcttgtagct
gaaataaaaaaagtgctagaaaccgcaattaagcaaggtggaacaacactaaaagatttt
aatcaagttgatggcaagcctggatattttgcacaggaattgcatgtatatggtcgcgcc
aagaaaaaatgcctactatgtagctcaattattcaagaagagaaaatcggacaacgaaac
actttttggtgtggacattgtcagccatttaataaataa

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