| Entry |
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| Gene name |
holC
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| Definition |
(RefSeq) DNA polymerase III subunit chi (EC:2.7.7.7)
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| KO |
| DNA polymerase III subunit chi [EC: 2.7.7.7] |
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| Organism |
vfi Aliivibrio fischeri ES114
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| Pathway |
| Purine metabolism | | Pyrimidine metabolism | | Metabolic pathways | | DNA replication | | Mismatch repair | | Homologous recombination |
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| Module |
| DNA polymerase III complex, bacteria |
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| Brite |
KEGG Orthology (KO) [BR:vfi00001]
Metabolism
Nucleotide metabolism
00230 Purine metabolism
VF_0412 (holC)
00240 Pyrimidine metabolism
VF_0412 (holC)
Genetic Information Processing
Replication and repair
03030 DNA replication
VF_0412 (holC)
03430 Mismatch repair
VF_0412 (holC)
03440 Homologous recombination
VF_0412 (holC)
Enzymes [BR:vfi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VF_0412 (holC)
DNA replication proteins [BR:vfi03032]
Prokaryotic Type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VF_0412 (holC)
DNA repair and recombination proteins [BR:vfi03400]
Prokaryotic Type
SSBR (single strand breaks repair)
MMR (mismatch exicision repair)
DNA polymerase III holoenzyme
VF_0412 (holC)
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-ProteinID: NCBI-GeneID: UniProt: |
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| Position |
I:complement(442324..442767)
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| AA seq |
147 aa  
MSQALFYVLEPTSPAATTDGQLKFVCQLAHYYYSQNARVYVLAQDKEQALLIDEALWQYD
VSEFTPHNLVGEGPKSGSPIEIGWGTLRSSGRRHVLINLAQEVASFAVSFAQVVDFVPCE
EKSKQQARERYKIYRNAGRAMQTEILK |
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| NT seq |
444 nt  +upstreamnt +downstreamnt
atgagccaagccctgttttatgttttagaacccacatctccagctgcaaccactgatggt
cagctaaaatttgtgtgtcagcttgctcactattattactctcaaaatgcacgagtgtat
gtattagcccaagataaagaacaagccttgctgattgatgaagcactttggcaatatgat
gtatcagaatttacgccacacaatttagttggagaagggccaaaatcaggctcccctatc
gaaattggttggggaacattacgctcatcaggacgccgtcatgtgttaattaatttagct
caagaggtcgcaagttttgctgtttcctttgctcaagtggtagacttcgtaccttgcgaa
gaaaaaagcaaacaacaagctcgagaaaggtataaaatataccgaaatgcaggccgagcc
atgcaaaccgagatactgaaatga |
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