KEGG T00236: VF

Vibrio fischeri ES114: VF_0823

Entry

VF_0823 CDS T00236

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

vfi Vibrio fischeri ES114

Pathway

vfi00020	Citrate cycle (TCA cycle)
vfi00310	Lysine degradation
vfi00380	Tryptophan metabolism
vfi01100	Metabolic pathways
vfi01110	Biosynthesis of secondary metabolites
vfi01120	Microbial metabolism in diverse environments

Module

vfi_M00009	Citrate cycle (TCA cycle, Krebs cycle)
vfi_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:vfi00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:vfi00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:vfi00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

59711430

NCBI-GeneID:

3277859

UniProt:

Q5E6M8

Position

I:902018..904834

AA seq 938 aa
MQNSVMKAWLESSHLAGANATYVEELYEFYLSDPEIVSDEWREVFDALPVNQAGTAEQAH
TPVRDYFRRLAKETKQFSAQVNDPDVDAKQVKVLQLINAYRFRGHQNANLDPLGLQIHEY
VAELEPAFHNLTDEDFSETFNVGSFASGQETMKLSDLYDALRSTYCGSVGAEYMHITNTE
EKRWIQQRLESVAGKPSFTSQEKLTFLEELTAAEGLERYLGAKFPGAKRFSLEGGDAMVP
MVKELIRHAGSCGGREVVIGMAHRGRLNMLINVLGKKPQDLFDEFAGKHGDSWGTGDVKY
HQGFSSDFATPGGDVHLALAFNPSHLEIVNPVVIGSVRARQDRLNDKAGDKVIPITIHGD
SAIAGQGVVAETFNMSQARAFYVGGTIRIVVNNQVGFTTSNPKDTRSTQYCTDIAKMVQA
PIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPNATQPLMYQKI
KKHPTPRKLYADTLIERQDLELETATQLINEYRDALDHGEVVVKEWRPMKLHNVDWSPFI
GHDWNMEWDNEFNKERLVELGQRICQYPESHKLHSRVNKLYNDRMSMIAGEKAIDWGMAE
TLAYATLVDEGKRIRITGQDSGRGTFFHRHAVLHNQSDASTYVPLSNVHDKQGPFEVHDS
VLSEAAVLAFEYGYATAEPSGLTIWEAQFGDFANCAQVVVDQFISSGEQKWGRMCGLTML
LPHGYEGQGPEHSSARLERYLQLCAEQNMQVVVPSTPAQVYHMLRRQVVRPMRRPLVVMS
PKSLLRHPLCTSTLEELAEGNFQSAIPEIDALDPKQVKRVVFCSGKVYFDLLEQRRTNEQ
NDIAIVRIEQLYPFPKEDVEAAIAEYTNVVDYVWCQEEPQNQGAWYSSQHNFRSALPDGA
ILHYAGRPASASPAVGYMSVHVKQQKALVEDALTLDKN

NT seq 2817 nt +upstreamnt +downstreamnt
atgcagaatagcgtgatgaaggcatggctcgagtcttcacatttagctggcgctaatgca
acgtacgtagaagaactctacgaattctatctcagtgacccggaaatcgttagtgacgaa
tggcgagaagtttttgatgcgctgccagtaaatcaagctggtacagcagagcaagctcat
actcctgttcgtgattatttccgtcgtcttgcgaaagaaaccaagcaatttagcgctcaa
gttaacgatccagacgtagatgctaagcaagttaaggtactgcaacttattaatgcgtac
cgtttccgtgggcatcaaaatgcaaatctcgatccattaggtttgcaaattcatgaatat
gttgctgaattagaaccagcatttcataacttaaccgatgaagatttctcagaaacgttt
aacgttggctcttttgcttcaggccaagagacaatgaaactttctgatttgtatgatgca
ttacgcagcacttattgtggctctgttggtgcagaatatatgcatattactaatacagag
gaaaaacgttggattcaacaacgtctagaatctgtagctggtaagccatcttttacttct
caagaaaaactcacattcctagaagagctcacggctgctgaaggccttgaacgctatctt
ggtgctaagttccctggagcgaaacgtttctcactggaaggtggcgatgccatggttcct
atggtgaaagagttaattcgtcatgcgggttcgtgtggtggtagagaagtcgttattggt
atggctcaccgtggccgtttaaatatgctaatcaacgtacttggcaaaaagccacaagat
ttattcgatgaatttgctggtaagcatggcgattcatggggtacaggtgatgttaagtac
caccaaggtttctcttctgatttcgcaactccgggtggagatgtgcatttagcattggct
ttcaacccatctcacttagaaattgtaaacccagtagttattggttcggttcgtgctcgc
caagatcgtttaaacgataaagcgggtgataaagtaattcctatcactattcatggtgat
tctgctattgcagggcaaggcgtggtagctgagacatttaatatgtcacaagctcgtgct
ttctatgtgggtggtacgattcgcattgtcgtgaataaccaagttggttttaccacatca
aatccgaaagatactcgttcaactcaatattgtactgatattgcaaaaatggttcaggca
ccaatattccatgtgaatgcagatgatcctgaagccgttgcttttgtaacacgaattgca
ttggattacagaaacgaatttaagcgtgatgtagtgattgatttagtgtgttatcgccgc
catggtcataatgaagctgatgagccaaatgcaacgcaaccattgatgtaccaaaaaatc
aaaaaacacccaacgccacgtaaattgtatgcggacacattaattgagcgccaagatctt
gagttagagacggccactcaacttattaatgagtatcgagatgcactagaccatggtgaa
gttgtggtgaaagagtggcgtccaatgaaactacataatgtagattggtcaccatttatt
ggtcatgattggaatatggaatgggacaacgaattcaataaagagcgcttagttgagctt
ggtcagcgaatttgccaatacccagaaagccataaattacacagccgagtaaataagtta
tataacgaccgtatgtcaatgattgctggagaaaaagcaattgattggggtatggctgaa
acattagcttatgcgacgcttgttgatgaaggtaagcgtattcgtattactggccaagat
tctggtcgtggtactttcttccatcgtcacgcagtactacataatcaatctgatgcaagt
acatacgtaccgctatcaaatgttcatgataaacaaggtccatttgaagtccatgattct
gttttatcagaagctgccgtattagcgtttgagtatggttatgcaacggcagagccgagt
ggtttaacgatttgggaagcgcaatttggtgattttgctaactgtgcccaagttgttgtg
gatcagttcatttcttcaggtgagcaaaagtggggccgtatgtgtggtctaactatgctg
ctaccgcacggttatgaaggtcaaggtcctgagcactcttctgcacgtttagagcgttat
ttacagctttgtgctgaacaaaatatgcaagtggttgtgccatcaacaccggcgcaagtt
tatcacatgttacgtcgtcaagtggttcgcccaatgcgtcgtccattagtggtaatgtca
cctaaatctttactacgtcatccattatgtacatcaacacttgaagagcttgctgaaggt
aacttccagtcagcgattcctgagattgatgcgttagatcctaaacaagtcaaacgagtt
gttttctgttctggtaaggtttatttcgaccttctggaacaacgtcgaacgaatgaacag
aatgacattgcaattgttcgtattgaacaactgtacccattccctaaagaagacgtagaa
gcagcaatagctgaatatacaaatgttgttgattatgtttggtgtcaagaagaacctcaa
aaccaaggtgcttggtattcaagccaacataacttccgctcagcattacctgatggtgcg
attctacattatgcaggacgcccagcatctgcttcgccagcagtaggttatatgtcggtg
cacgtgaaacaacaaaaagcgttagtagaagacgctctgaccctagataagaactag

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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