KEGG   Aliivibrio fischeri ES114: VF_1235
Entry
VF_1235           CDS       T00236                                 
Symbol
pheS
Name
(GenBank) phenylalanine tRNA synthetase, alpha subunit
  KO
K01889  phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Organism
vfi  Aliivibrio fischeri ES114
Pathway
vfi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    VF_1235 (pheS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vfi01007]
    VF_1235 (pheS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vfi03016]
    VF_1235 (pheS)
Enzymes [BR:vfi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     VF_1235 (pheS)
Amino acid related enzymes [BR:vfi01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   VF_1235 (pheS)
Transfer RNA biogenesis [BR:vfi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    VF_1235 (pheS)
 Prokaryotic type
    VF_1235 (pheS)
SSDB
Motif
Pfam: tRNA-synt_2d Phe_tRNA-synt_N tRNA_synthFbeta
Other DBs
NCBI-ProteinID: AAW85730
UniProt: Q5E5G6
Position
I:1372287..1373270
AA seq 327 aa
MQHLDEIIANATAEIEQAGSLVALDEVRVQYLGKKGHLTLQLQGLGKLDPSERREAGQLI
NKGKQAVQAMLTERKDALQTAELEAKLAAETIDVSLPGRRIENGGLHPVTRTVERIEQFF
GELGFSTESGPEIEDAFHNFDALNIAEDHPARTDHDTFFFNPDLMLRTHTSGVQIRTMEN
GKPPFRFIAPGRVYRNDYDQTHTPMFHQVEGMLVDENVNFAQLKGILHDFLCNFFEEEVE
VRFRPSFFPFTEPSAEVDVKRKDGKWLEVLGCGMVHPNVLRSVGIDPEKYSGFAFGMGVE
RLTMLRYGVNDLRAFFENDLRFLKQFK
NT seq 984 nt   +upstreamnt  +downstreamnt
atgcaacatctagacgagatcattgccaatgcaacggcagaaattgaacaagctggctct
ttagtcgctctggacgaagtccgtgttcaatatttaggtaaaaaaggccacttaacactt
caacttcaaggtctaggtaaacttgacccatctgagcgtcgtgaagcgggtcaattaatt
aacaaaggtaagcaagcagtacaagcaatgctaacagagcgtaaagacgcactgcaaacg
gctgagcttgaagcaaaacttgctgctgaaactatcgatgtgagccttcctggccgtcgt
atcgagaacggtggtttacaccctgttactcgtactgttgagcgtattgagcaatttttt
ggcgagctaggctttagcactgagtctggtcctgaaatcgaagatgcattccataacttc
gacgcattaaacattgcagaagatcacccagctcgtactgaccacgacacctttttcttt
aaccctgatctaatgctacgtacgcacacatcaggtgttcagatccgtacaatggaaaac
ggtaaaccaccattccgtttcattgcacctggccgtgtataccgtaacgattacgaccaa
actcacacgccaatgttccaccaagtggaaggtatgttagttgatgagaacgtaaacttt
gcacaacttaaaggtattcttcacgatttcctttgtaatttctttgaagaagaagttgaa
gtgcgtttccgtccttcattcttcccattcactgagccttcagctgaagttgatgttaag
cgtaaagatggtaaatggttagaagtattaggttgtggcatggttcaccctaatgtactt
cgctctgttggcatcgaccctgaaaaatactcaggctttgcgtttggtatgggtgttgag
cgtctaactatgcttcgttacggcgtaaatgaccttcgtgcgttcttcgagaacgatctt
cgtttccttaaacaattcaagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (57)   

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