KEGG T00236: VF

Vibrio fischeri ES114: VF_A0347

Entry

VF_A0347 CDS T00236

Gene name

ebgA

Definition

cryptic beta-D-galactosidase subunit alpha (EC:3.2.1.23)

Orthology

K12111

evolved beta-galactosidase subunit alpha [EC:3.2.1.23]

Organism

vfi Vibrio fischeri ES114

Pathway

vfi00052	Galactose metabolism
vfi00511	Other glycan degradation
vfi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:vfi00052]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:vfi00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 SseB

Other DBs

NCBI-GI:

59713530

NCBI-GeneID:

3280375

UniProt:

Q5E0M9

Position

II:complement(385181..388282)

AA seq 1033 aa
MNNWENFFRLNENRMAPRAYFFSYDSVQAARTFQRELSSHYQLLSGQWTFNFFTNPLLVP
EEFYSQHMSDWGNITVPNMWQMEGHGDLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLG
ETWNNKQIIIKFDGVETYFEVYVNGNYVGFSKGSRLTAEFDISEFAQQGENLLSVRVMQW
ADSTYIEDQDMWWTGGIFRDVYLVGKEQVHVQDITIRTDFDENYQSATLSCKADLENLTN
NSVSNYSLGYALFDGQTVVSEGTVNSLSFDANHCVDINIDMESPTHWTAENPYLYQLILT
LKDENGKTLEIIPNRVGFRDIKVRDGLFYINNKYVMLHGVNRHDNDHLKGRAVGMDRVEK
DIVLMKQHNINSVRTAHYPNDPRFYELCDVYGLFVMGETDVETHGFANVGDLSRITNDPA
WEHVFVERIERHIHAQKNHASIIMWSLGNESGYGCNIKSMYDAAKAIDDTRLVHYEEDRD
AEVVDIISTMYSRAQLMNAFGEHPHNKPRIICEYAHAMGNGPGGLTEYQNVFYKHDSIQG
HYVWEWCDHGILAKDENGTEFLKYGGDYGDYPNNYNFCMDGLVYSDQTPGPGLKEYKQVI
APVKIRAKDTANGVFTVDNKLWFSNLDDYTITAEIRAEGETLQSTTFKVEGLTENSSRDI
EITLPELDGRETFVNFTVRKNSRTLYSEANHDIAVYQVQLKENTEQLPVFTNSNAIALDI
TASRLDYVVKGLNFALTFSKVNGKLTSWVVNGDELIASAPKLNFFKPMVDNHKQEHEGLW
EPAHLQIMQEHFRSIDLDASNGKATFTVTSIIAPPVFDFGMRCTYVYEINKEGQLNIQLS
GERYGDYPHVIPVIGLDLGINNDFDQVQYYGRGPEENYQDSQQANMIDVYQTTIADMFEN
YPFPQNNGNRQHVRWASLANRHGNGLFVKPEQEINFSAWFYTNQNIHEAQHTIELEKSGY
ITLNLDHKLMGLGSNSWGSEVLDSYRVYMDKFQYALTLVPFQQGGCSPKALANHTFISNT
AFTSKTTIEGGEK

NT seq 3102 nt +upstreamnt +downstreamnt
gtgaacaattgggaaaacttcttccgcttaaatgagaaccgcatggctccacgcgcttac
ttcttctcatatgactcagttcaagctgctcgtacattccaacgtgaattaagcagtcat
taccaattattaagtggtcaatggacattcaatttctttactaatcctttacttgttcct
gaagaattttattctcaacacatgagtgattggggcaatattacggttcctaacatgtgg
caaatggaaggtcatggcgatcttcaatacacagatgaaggttttcctttcccgattgat
gttccttttgtaccaagcgataacccaacaggtgcttaccaacgcacgttcactttaggt
gaaacatggaacaacaaacaaatcatcatcaaatttgatggtgtagagacttactttgaa
gtctacgtaaatggtaattatgttggttttagtaaaggcagtcgtttaaccgctgaattt
gatatctctgaatttgcacaacaaggtgaaaacctgctatctgttcgtgttatgcaatgg
gctgactccacttacattgaagaccaagacatgtggtggactggcggtatcttccgtgat
gtttacttagtaggtaaagagcaagtacacgttcaagacattactatccgcactgatttt
gatgaaaactaccaaagtgcaacattatcttgtaaagcagatttagaaaacctaacaaat
aactcagtatctaattattcactaggttacgcactgtttgatggtcagactgtcgtttct
gaaggcacagtcaattcgctttcttttgatgcgaaccattgcgttgatatcaatatcgat
atggaaagccctacgcattggacagcagaaaacccttacctataccaactaatcctaact
ctaaaagatgaaaacggtaaaacactagaaatcattccaaatcgagttggtttccgtgat
attaaagtacgcgacggtctgttctacatcaataacaaatacgtcatgcttcatggtgtg
aaccgccacgataacgaccatttaaaaggtcgcgctgtaggtatggaccgtgttgagaaa
gacattgttttaatgaaacaacacaacatcaactcggtacgtactgcacactaccctaac
gacccacgtttttatgaactgtgtgatgtgtacggtctgtttgttatgggtgaaaccgat
gtagaaacgcacggctttgctaacgttggtgatttaagccgcattaccaatgatcctgca
tgggagcatgtatttgtagagcgtattgagcgtcacattcacgcccaaaagaaccacgca
tccatcatcatgtggtcactgggtaacgaatcaggctatggttgtaacatcaaatctatg
tacgatgcagcaaaagcaattgatgacactcgtctagttcattatgaagaagatcgtgat
gctgaagtcgttgatatcatcagtactatgtattctcgtgctcaactaatgaatgctttt
ggtgaacatccacacaataaaccacgtattatttgtgaatacgcacacgcaatgggtaat
ggccctggcggattaactgaataccaaaacgtattctacaagcatgattctattcaaggt
cattacgtatgggaatggtgtgatcacggtattcttgctaaagatgaaaacggcacagag
ttcttaaaatacggcggtgattacggcgattatccaaacaactacaacttctgtatggat
ggcttagtttattcagaccaaactccgggtcctggcttaaaagaatataagcaagttatc
gcgccagttaaaatccgtgcaaaagacacagcaaacggtgttttcactgtcgataacaag
ctatggttctcaaaccttgatgactacaccattaccgctgagatccgtgctgaaggcgaa
acgctacaaagcacaacattcaaagtggaaggcttaactgaaaactcaagccgagatatt
gaaataacactacctgaactggatggacgcgaaacattcgttaatttcacagtacgtaaa
aattctcgcactctatacagcgaagcgaatcacgatattgcggtttaccaagttcaatta
aaagagaacacagagcaactgcctgtcttcacaaacagcaatgcaatcgcacttgatatc
acagcgtctcgtttggattatgtagtaaaagggctgaacttcgcacttactttctcgaaa
gtgaacggtaaattaacctcatgggttgtgaatggtgatgaattaattgcaagcgcacct
aaactgaacttctttaaaccaatggtggataaccataaacaggaacatgaaggtctgtgg
gagcctgcgcaccttcaaatcatgcaagagcatttccgctctatcgaccttgatgcttca
aatggtaaagccactttcacggtaaccagcattattgccccacctgtgtttgattttggt
atgcgttgtacttacgtttacgaaattaacaaagaaggccagctaaacattcaactctct
ggtgagcgttacggtgattaccctcatgttatccctgtaattggtttggatcttggtatc
aacaatgactttgaccaagttcaatactatggtcgtggcccagaagaaaactatcaagac
agccaacaagcaaacatgattgatgtataccaaaccaccattgctgatatgtttgagaac
tacccgttcccacaaaataatggcaaccgtcaacacgttcgttgggcatcgctagctaat
cgtcatggcaatggtttatttgtgaaacctgagcaagaaatcaacttcagtgcttggttc
tacactaaccaaaacattcatgaagcgcagcacaccattgaacttgagaagagtggttat
atcactttaaaccttgaccataagttaatggggttaggttcaaattcatggggttcagaa
gtattagattcataccgtgtttacatggataaattccaatacgcactgactttggttcca
tttcaacaaggtggctgttcaccaaaagcattggcgaatcacacattcatctcaaacaca
gcattcacttcaaaaacaacaattgaaggcggagaaaagtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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