KEGG T00236: VF

Vibrio fischeri ES114: VF_A1010

Entry

VF_A1010 CDS T00236

Definition

beta-hexosaminidase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

vfi Vibrio fischeri ES114

Pathway

vfi00511	Other glycan degradation
vfi00520	Amino sugar and nucleotide sugar metabolism
vfi01100	Metabolic pathways
vfi01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:vfi00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:vfi00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 CHB_HEX Glyco_hydro_20b CHB_HEX_C LPAM_1 CHB_HEX_C_1 BNR

Other DBs

NCBI-GI:

59714193

NCBI-GeneID:

3280717

UniProt:

Q5DYR6

Position

II:complement(1133541..1136201)

AA seq 886 aa
MELYIMFKKTLLSTLILAGLAGCSSTSSEQSAVNQLAENLDINYTVITNQGADDGLACKE
LQAEWASCNKVNMTLTNTGEAIDSKDWTIYFHSIRLILDVENDQFKITRVTGDLHKLEPT
EKFDGFAAGEEVVIPLIAEYWQLFETDFMPGAFVTAPGAEARNIISLDTEDTGEYVDEII
GVQLKRTLADNNVVATANTRFEKNADVVEENVAGHIIPTPLKTTLTNKTVDLAKGISITA
NGIDADQLAALNQRAELLGLETAGEYPVSVSVDKKQFKDGVSGAYKLDVTEGKATVVAFD
QAGAFYGVQSLLALVSLDNSEIPTLNVEDAPRFEYRGVMVDVARNFHSKEAILATVDQMA
AYKLNKLHLHLTDDEGWRLEIPGLPELTDIGGNRCFDETETSCLLPQLGSGADSDNFGSG
YFTTEDYLEILTYAKNRNIEVIPEIDMPAHSRAAVMSMEARYARLAAEGKMEEANQYRLM
DPKDESNVTTVQFYNKQSFINPCLDSSATFVDKVITEVAAMHKAAGVPLSTWHFGGDEAK
NIKLHAGFQDINDEEKIAWKGDLDLSKQDFPFAKSPQCQSLIASGEVADFEHLPSHFAEQ
VSKIVAKQGIPHFQAWQDGLKHSEDAGAFATESVRANFWDTLYWGGGASAYEWAEKGYDV
VISNPDYVYMDFPYEVDAKERGYYWATRATDTRKMFGFAPENLPQNAETSVDRDGNGFES
AGTVTPKKPFYGLSAQLWSETVRTDEQYEYMVFPRVIAAAERAWHEASWENEYKAGVKYS
LQTNLVDKKAQLADWTKFANTMGQRELAKLERAGIDYRLPIPGAEIANGELSMNISFPGV
TLQYSVDGGKTWAEYDNANKPKVTGDVQIRSASFTGERVSRVTSVK

NT seq 2661 nt +upstreamnt +downstreamnt
atggaattgtatatcatgtttaagaaaacgcttttatcaaccctaatactagctggccta
gcaggctgttcatcaacatcatctgagcagtcagcggttaatcaactagctgaaaaccta
gatattaactacacagttattacaaaccaaggtgctgatgacggtcttgcatgtaaagag
cttcaagctgaatgggcatcatgtaacaaagtaaacatgacgttaactaatacaggtgaa
gctattgattcaaaagattggacaatttatttccacagcatccgtttaattttagatgtt
gaaaacgaccaatttaaaattactcgcgtaacgggtgatttgcataaacttgaaccaact
gaaaagtttgatggttttgcggcaggtgaagaagtggttattccactgatcgctgaatac
tggcaattatttgaaactgactttatgccgggtgcatttgtaacggctccaggtgcagaa
gctcgtaatatcatttctttagatacagaagatacaggcgaatacgtagatgaaatcatc
ggtgttcaactaaaacgtactcttgctgataataacgttgtagcaacagcaaacacacgt
tttgagaagaacgccgatgttgttgaagagaatgtggcaggtcacattattccaacacca
ttaaaaacaacactaacgaacaaaacggtagatttagctaaaggtatctctattactgca
aacggaattgatgctgaccaacttgcagcgttaaatcaacgtgcagaactacttggcctt
gaaactgcgggtgagtacccagtatcagtttctgttgataagaaacaatttaaagacggt
gtatctggtgcatacaaactagatgtgactgaaggtaaagcaacggttgtagcatttgac
caagcgggcgcattctacggcgtacaatctttacttgctctagtaagtttagataactca
gaaatcccaacgttaaacgtagaagatgctccacgttttgaataccgtggtgtaatggtt
gacgtagctcgtaacttccactcaaaagaagcgattctagcaactgttgatcaaatggcg
gcatacaagctgaacaaactacaccttcacttaactgatgatgaaggttggcgtttagag
atccctggtcttcctgagctaacggatattggtggtaatcgttgttttgatgagacagaa
acctcttgtctattacctcaactaggttctggtgctgattcagataactttggttctggc
tacttcacaacagaagattacctagaaatcttaacttacgcgaaaaaccgtaacattgaa
gtgattccagaaatcgatatgccagcccactcacgtgcagcagttatgtcaatggaagcg
cgttacgcacgtcttgctgctgaaggtaagatggaagaagcgaatcaataccgtctgatg
gatccaaaagatgaatcaaacgtaactacggttcagttctacaacaaacaaagttttatc
aacccatgtctagattcatctgcaacgtttgtagataaagtaatcacagaagttgcagca
atgcataaagcggcaggtgttcctctatcaacatggcacttcggtggtgatgaagcgaaa
aacatcaaacttcacgctggtttccaagacatcaacgatgaagagaaaattgcatggaaa
ggagatttagatctatctaaacaagatttcccatttgcaaaatcgccacagtgtcagtct
ctgatcgcaagcggtgaagttgctgatttcgaacatttaccaagccacttcgcagagcaa
gtatctaagatcgttgctaagcaaggtatcccacacttccaagcatggcaagatggccta
aaacactctgaagatgcaggcgcattcgcaacggaatcagtacgtgctaacttctgggac
acattgtactggggcggtggtgcttcagcttacgaatgggctgaaaaaggttacgacgta
gttatctctaacccagattacgtttacatggacttcccatacgaagtggatgcaaaagag
cgtggttactactgggcaacacgtgcaacagacactcgtaagatgtttggttttgcacca
gaaaacctacctcaaaatgcggaaacatcagtagaccgtgacggtaatggctttgaaagt
gcgggtacagtaacacctaagaaacctttctacggtctatctgctcaactttggtctgaa
acagtacgtactgatgagcaatatgaatacatggtgttcccacgtgttattgcagcggct
gagcgtgcatggcatgaagcatcttgggaaaatgaatacaaagcaggtgttaagtactct
ctacaaacaaacctagtagataagaaagcacaattagctgattggactaagtttgcaaac
acaatgggtcaacgtgaattagctaagcttgaaagagcgggcattgattaccgtctacca
atcccaggtgcagaaattgcgaacggtgagctaagcatgaacatttcattcccaggcgta
acgctacaatactctgtagatggcggtaaaacatgggctgaatacgacaatgcaaacaaa
ccaaaagtaactggtgacgttcaaattcgttcagcatcatttactggtgagcgtgttagc
cgtgtaactagcgttaagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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