KEGG T00754: VFMJ11

Vibrio fischeri MJ11: VFMJ11_0861

Entry

VFMJ11_0861 CDS T00754

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

vfm Vibrio fischeri MJ11

Pathway

vfm00020	Citrate cycle (TCA cycle)
vfm00310	Lysine degradation
vfm00380	Tryptophan metabolism
vfm01100	Metabolic pathways
vfm01110	Biosynthesis of secondary metabolites
vfm01120	Microbial metabolism in diverse environments

Module

vfm_M00009	Citrate cycle (TCA cycle, Krebs cycle)
vfm_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:vfm00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:vfm00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:vfm00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

197335361

NCBI-GeneID:

6805658

UniProt:

B5FC26

Position

I:891690..894506

AA seq 938 aa
MQNSVMKAWLESSHLAGANATYVEELYELYLSDPEIVSDEWREVFDALPVNQAGTAEQAH
TPVRDYFRRLAKETKQFSAQVNDPDVDAKQVKVLQLINAYRFRGHQNANLDPLGLQIHEY
VAELEPAFHNLTDEDFSETFNVGSFASGQETMKLSDLYDALRSTYCGSVGAEYMHITNTE
EKRWIQQRLESVAGKPSFTSQEKLTFLEELTAAEGLERYLGAKFPGAKRFSLEGGDAMVP
MVKELIRHAGSCGGREVVIGMAHRGRLNMLINVLGKKPQDLFDEFAGKHGDSWGTGDVKY
HQGFSSDFATPGGDVHLALAFNPSHLEIVNPVVIGSVRARQDRLNDKAGDKVIPITIHGD
SAIAGQGVVAETFNMSQARAFYVGGTIRIVVNNQVGFTTSNPKDTRSTQYCTDIAKMVQA
PIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPNATQPLMYQKI
KKHPTPRKLYADTLIERQDLELETATQLINEYRDALDHGEVVVKEWRPMKLHNVDWSPFI
GHDWNMEWDNEFNKERLVELGQRICQYPESHKLHSRVNKLYNDRMSMIAGEKAIDWGMAE
TLAYATLVDEGKRIRITGQDSGRGTFFHRHAVLHNQSDASTYVPLSNVHDKQGPFEVHDS
VLSEAAVLAFEYGYATAEPSGLTIWEAQFGDFANCAQVVVDQFISSGEQKWGRMCGLTML
LPHGYEGQGPEHSSARLERYLQLCAEQNMQVVVPSTPAQVYHMLRRQVVRPMRRPLVVMS
PKSLLRHPLCTSTLEELAEGNFQSAIPEIDALDPKQVKRVVFCSGKVYFDLLEQRRTNEQ
NDIAIVRIEQLYPFPKEDVEAAIAEYTNVVDYVWCQEEPQNQGAWYSSQHNFRSALPDGA
ILHYAGRPASASPAVGYMSVHVKQQKALVEDALTLDKN

NT seq 2817 nt +upstreamnt +downstreamnt
atgcagaatagcgtgatgaaggcatggctcgagtcttcacatttagctggcgctaatgca
acgtacgtagaagaactctacgaactctatctcagtgacccggaaatcgttagtgacgaa
tggcgagaagtttttgatgcgctgccagtaaatcaagctggtacagcagagcaagctcat
actcctgttcgtgattatttccgtcgtcttgcgaaagaaaccaagcaatttagcgctcaa
gttaacgatccagacgtagatgctaagcaagttaaggtactgcaacttattaatgcatac
cgtttccgtgggcatcaaaatgcaaatctcgatccattaggtttgcaaattcatgagtat
gttgctgaattagaaccagcatttcataacttaaccgatgaagatttctcagaaacgttc
aacgttggctcttttgcttcaggccaagagacaatgaaactttctgatttgtatgatgca
ttacgcagcacttattgtggctctgttggtgcagaatatatgcatattactaatacagag
gaaaaacgttggattcaacaacgtctagaatctgtagctggtaagccatcttttacttct
caagaaaaactcacattcctagaagagctcacggctgctgaaggccttgaacgctatctt
ggtgctaagttccctggagcgaaacgtttctcactggaaggtggcgatgccatggttcct
atggtgaaagagttaattcgtcatgcgggttcgtgtggtggtagagaagtcgttattggt
atggctcaccgtggccgtttaaatatgctaatcaacgtacttggcaaaaagccacaagat
ttattcgatgaatttgctggtaagcatggcgattcatggggtacaggtgatgttaagtac
caccaaggtttctcttctgatttcgcaactccgggtggagatgtgcatttagcattggct
ttcaacccatctcacttagaaattgtaaacccagtagttattggttcggttcgtgctcgc
caagatcgtttaaacgataaagcgggtgataaagtaattcctatcactattcatggtgat
tctgctattgcagggcaaggcgtggtagctgagacatttaatatgtcacaagctcgtgct
ttctatgtgggtggtacgattcgcattgtagtgaataaccaagttggttttaccacatca
aatccaaaagatactcgttcaactcaatattgtactgatattgcaaaaatggttcaggca
ccaatattccatgtgaatgctgatgatcctgaagccgttgcttttgttacacgaattgca
ttggattacagaaacgaattcaaacgtgatgtagtgattgatttagtgtgttatcgccgc
catggccataatgaagctgatgagccaaatgcaacgcaaccattgatgtaccaaaaaatc
aaaaaacacccaacgccacgtaaattgtatgcggacacattaattgagcgccaagatctt
gagttagagacggccactcaacttattaatgagtaccgagatgcactagaccatggtgaa
gttgtggtgaaagagtggcgtccaatgaaactacataatgtagattggtcaccatttatt
ggtcatgattggaatatggaatgggataacgaattcaataaagagcgcttagttgagctt
ggtcagcgaatttgccaatacccagaaagccataaattacacagccgagtaaataagtta
tataacgatcgtatgtcaatgattgctggagaaaaagcaattgattggggtatggctgaa
acattagcttatgcgacgcttgttgatgaaggtaagcgtattcgtattactggccaagat
tctggtcgtggtactttcttccatcgtcacgcagtactacataatcaatctgatgcaagt
acatacgtaccgctatcaaatgttcatgataaacaaggtccatttgaagtccatgattct
gttttatcagaagctgccgtattagcgtttgagtatggttatgcaacggcagagccgagt
ggtttaacgatttgggaagcgcaatttggtgattttgctaactgtgcccaagttgttgtg
gatcagttcatttcttcaggtgagcaaaagtggggccgtatgtgtggtctaactatgctg
ctaccgcacggttatgaaggtcaaggtcctgagcactcttctgcacgtttagagcgttat
ttacagctttgtgctgaacaaaatatgcaagtggttgtgccatcaacaccggcgcaagtt
tatcacatgttacgtcgtcaagtggttcgcccaatgcgtcgtccattagtggtaatgtca
cctaaatctttactacgtcatccattatgtacatcaacacttgaagagcttgctgaaggt
aacttccagtcagcgattcctgagattgatgcgttagatcctaaacaagtcaaacgagtt
gttttctgttctggtaaggtttatttcgaccttctggaacaacgtcgaacgaatgaacag
aatgacattgcaattgttcgtattgaacaactgtacccattccctaaagaagacgtagaa
gcagcaatagctgaatatacaaatgttgttgattatgtttggtgtcaagaagaacctcaa
aaccaaggtgcttggtattcaagccaacataacttccgctcagcattacctgatggtgcg
attctacattatgcaggacgcccagcatctgcttcgccagcagtaggttatatgtcggtg
cacgtgaaacaacaaaaagcgttagtagaagacgctctgaccctagataagaactag

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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