KEGG   Vibrio furnissii: vfu_A00152
Entry
vfu_A00152        CDS       T01680                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vfu  Vibrio furnissii
Pathway
vfu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    vfu_A00152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vfu03400]
    vfu_A00152
Enzymes [BR:vfu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     vfu_A00152
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     vfu_A00152
DNA repair and recombination proteins [BR:vfu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     vfu_A00152
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zinc-ribbons_6 Auto_anti-p27 zf_UBZ NFACT_N zf-dskA_traR Lar_restr_allev
Other DBs
NCBI-ProteinID: ADT85387
Position
1:complement(168336..169139)
AA seq 267 aa
MGISPHLVGETVRSLTFRTPKLRWDIPAELKQMEGQVITAISRRAKYLMIETSVGSAIVH
LGMSGSLRVLDGDFPPAKHDHVDLTLTNGKVLRYNDPRRFGAWLWCPAGEHHEVLGHMGP
EPLTDEFNAAYLLHKARKKRVAVKSFIMDNKIVVGVGNIYANESLFSAHIHPLRPAHSLS
EAEWTSLVADIKAVLTTAIAQGGTTLKDFAQADGKPGYFAQELQVYGKKGQPCPRCGEPI
AELKIGQRNSFFCLQCQPVVPESPAKL
NT seq 804 nt   +upstreamnt  +downstreamnt
atgggcatctcaccgcatctggtgggagaaactgtgcgttccctgacgttccgcacgccg
aaactgcggtgggatattcccgctgaactgaagcagatggaagggcaagtgatcactgct
atttctcgccgcgccaaatacctaatgattgaaacgtcggtgggcagcgccattgtccac
ttgggcatgtcggggtcgctgcgcgtgctcgacggtgatttcccgcccgctaaacacgat
cacgtggatctgacgctgaccaacggcaaagtgctgcgttataacgacccgcgtcgtttc
ggggcttggttgtggtgtccggctggtgaacatcacgaagtgctaggtcatatggggccc
gagccgctcaccgacgaatttaatgcagcgtatctgctgcataaagcgcgcaagaaacgg
gtcgcggtgaagtcgtttattatggacaacaaaatcgttgtcggtgtgggcaacatctac
gccaatgaatcgctgttcagtgcgcatattcaccctttgcgacctgcgcattcgctgagc
gaagctgagtggacgtctttggtggcggacatcaaagcggtgttgacgactgccattgcg
caaggtggcaccacgctgaaagattttgcccaagcggatggcaaaccgggctattttgct
caggagttgcaggtgtatggtaaaaagggccaaccttgtccacggtgcggtgaaccgatc
gcggagctgaaaattggtcagcgcaactcgtttttttgcctacaatgccaacctgttgtg
ccggaaagtcccgctaaattgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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