KEGG T01680: vfu

Vibrio furnissii: vfu_A00250

Entry

vfu_A00250        CDS       T01680

Name

(GenBank) ATP-dependent DNA helicase Rep

K03656

ATP-dependent DNA helicase Rep [EC:5.6.2.4]

Organism

vfu Vibrio furnissii

Brite

KEGG Orthology (KO) [BR:vfu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vfu03400]
    vfu_A00250
Enzymes [BR:vfu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     vfu_A00250
DNA repair and recombination proteins [BR:vfu03400]
Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    vfu_A00250

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII AAA_11

Other DBs

NCBI-ProteinID:

ADT85480

Position

1:complement(276146..278161)

AA seq 671 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCDYKARHIAAVTFTNKAA
REMKERVGQTLGKAESRGLMVSTFHTLGLNIIRREYKQLGLKAGFSLFDDQDQLALLKEL
TEKQLDGDKDLLRQLTSTISNWKNDMLSPEQAKAQAQGEQQQLFAFCYEMYQKQMQAYNA
LDFDDLILMPVLLLRHHDEVRQRWRNRIRYLLVDEYQDTNSSQYELVKLLVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGQDFPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVVLANNEDHEAEKVTAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK
SLMQNRVPYKLSGGTSFFSRAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPATLEK
LGSYANMRGKSLFECSFELGLEQHLSGRGLENLRRFTQWLVAIADNAERGNTVDAVRSLV
RDIHYEDWLYETSSSAKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRD
MMERGEEDDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFVMCKERRQFGELLKPTQSRFLDELPFDDVEWEVKKKPLSQEERMAKGQA
HIANIRAMFKK

NT seq 2016 nt +upstreamnt +downstreamnt
atgaagctgaatccaagacaagatgaagccgtgaaatacgtatccggtccgtgcctggtt
ttggcgggggctggctcgggcaagactcgagtaatcaccaataaaattgcctatttggtt
cagcagtgtgactacaaggcgcgccatatcgcagccgtgacgtttaccaataaagccgcg
cgagaaatgaaagagcgcgtgggtcaaaccttggggaaagccgaatcccgtggtttgatg
gtttcgactttccatactctggggctcaatatcattcgtcgcgaatacaaacagctgggc
ttaaaagcgggtttctcgctgtttgatgatcaggaccagttggccctgctcaaagagctg
accgaaaaacagctcgatggcgataaggatttgctgcgccaattgacgagcaccatctcc
aattggaagaacgacatgctgtcgccggagcaggccaaagcgcaggcgcagggtgagcag
cagcaactgtttgcgttttgctacgagatgtatcaaaagcagatgcaggcgtacaacgca
ctcgattttgacgacttgattttgatgccggtgctgctgttgcgtcatcatgatgaggta
cgtcagcgttggcgtaaccgcattcgttacctgctggtcgacgaataccaagacaccaac
tccagtcagtatgagctggtgaaattgttggttggggagcgtggccgtttaaccgtggta
ggggatgatgaccagtcgatttactcatggcgcggcgcgaagccccaaaacctggtgttg
cttggccaagattttccgaatctgcgtttgattaaactggaacagaactaccgctccacc
agtcggattttgcgcgcggcgaacattttgatcgccaacaacccgcacgtgtatgagaag
tcactgttttccgagattcccgacggagaaaaactcaaagtcgtgctggcgaataatgag
gatcacgaagcggaaaaagtgacggcggagatcatcgcgcacaaattcctcaaccgaacc
gaatatcgtgattatgcgattttgtatcgcgggaaccatcagtcacgcttgattgaaaaa
tctttgatgcagaaccgcgtgccgtacaagctctccggcggcacctcgttcttttcgcgc
gctgaaattaaagacatcatggcttatctgcgcgtgctggtgaatccggacgatgacaac
gcgttcttgcgtattgtgaacacgccgcggcgtgagattggcccggcgaccctagaaaaa
ctgggtagttacgccaacatgcgtggcaaaagcttgtttgagtgcagttttgagttgggg
ttggagcagcacctgtccggtcgtggtttggagaatttgcgccgttttacccaatggttg
gtggcgatcgccgacaatgccgaacggggtaataccgtcgatgcggtgcgttcgttggtg
cgtgacattcattacgaagactggttgtacgaaacctcctccagcgctaaagcggcggag
atgcggatgaaaaacgtctcggatctttactcgtggattgtggcggatttggaaggtgac
aattacgatcaggaagagaaaaccctcaaagaggtggtgcaacgcctcaccctgcgcgac
atgatggagcgcggtgaagaagatgacgacagcgacgcggtgcaactgatgacgctgcat
gcttccaaagggttggagtttccgtatgtgtatttgattggtgcggaagagggcattttg
ccccatcaaaccagcattgatgaagataacgtcgaggaagaacgccgtttgatgtacgtg
ggtattactcgggcgcagcgggaactgacatttgtgatgtgcaaagagcggcgccagttt
ggtgaattgctcaagccgacgcagagccgctttttggatgagctgccgtttgacgatgtc
gaatgggaagtgaagaaaaaaccgctgtcgcaagaagagcgaatggccaaaggtcaggca
cacattgccaacattcgcgccatgtttaagaagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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