KEGG T40000: 1494052

Viruses: 1494052

Entry

1494052           CDS       T40000

Symbol

PVYgp1

Name

(RefSeq) Potato virus Y; polyprotein

Virus

12216 Potato virus Y

SSDB

Motif

Pfam:

Peptidase_C6 Potyvirid-P3 RdRP_1 Poty_PP Poty_coat Peptidase_S30 Peptidase_C4 Helicase_C DEAD Flavi_DEAD ResIII

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

RS:

UniProt:

Structure

Position

NC_001616:185..9376

AA seq 3063 aa
MATYMSTICFGSFECKLPYSPASCEHIVKEREVPASVDPFADLETQLSARLLKQKYATVR
VLKNGTFTYRYKTDAQIMRIQKKLERKDREEYHFQMAAPSIVSKITIAGGDPPSKSEPQA
PRGIIHTTPRMRKVKTRPIIKLTEGQMNHLIKQIKQIMSEKRGSVHLISKKTTHVQYKKI
LGAYSAAVRTAHMMGLRRRVDFRCDMWTVGLLQRLARTDKWSNQVRTINIRRGDSGVILN
TKSLKGHFGRSSGGLFIVRGSHEGKLYDARSRVTQSILNSMIQFSNADNFWKGLDGNWAR
MRYPSDHTCVAGLPVEDCGRVAALMAHSILPCYKITCPTCAQQYASLPVSDLFKLLHKHA
RDGLNRLGADKDRFIHVNKFLIALEHLTEPVDLNLELFNEIFKSIGEKQQAPFKNLNVLN
NFFLKGKENTAHEWQVAQLSLLELARFQKNRTDNIKKGDISFFRNKLSAKANWNLYLSCD
NQLDKNANFLWGQREYHAKRFFSNFFEEIDPAKGYSAYEIRKHPSGTRKLSIGNLVVPLD
LAEFRQKMKGDYRKQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAIESTFYPPTKKHLVIG
NSGDQKFVDLPKGDSEMLYIAKQGYCYINVFLAMLINISEEDAKDFTKKVRDMCVPKLGT
WPTMMDLATTCAQMRIFYPDVHDAELPRILVDHDTQTCHVVDSFGSQTTGYHILKASSVS
QLILFANDELESDIKHYRVGGVPNASPELGSTISPFREGGVIMSESAALKLLLKGIFRPK
VMRQLLLDEPYLLILSILSPGILMAMYNNGIFELAVRLWINEKQSIAMIASLLSALALRV
SAAETLVAQRIIIDAAATDLLDATCDGFNLHLTYPTALMVLQVVKNRNECDDTLFKAGFP
SYNTSVVQIMEKNYLNLLNDAWKDLTWRENYPQHGTHTEQNALSTRYIKPTEKADLKGLY
NISPQAFLGRSAQVVKGTASGLSERFNNYFNTKCVNISSFFIRRIFRRLPTFVTFVNSLL
VISMLTSVVAVCQAIILDQRKYRREIELMQIEKNEIVCMELYASLQRKLERDFTWDEYIE
YLKSVNPQIVQFAQAQMEEYDVRHQRSTPVVKNLEQVVAFMALVIMVFDAERSDCVFKTL
NKFKGVLSSLDYEVRHQSLDDVIKNFDERNEIIDFELSEDTIRTSSVLDTKFSDWWDRQI
QMGHTLPHYRTEGHFMEFTRATAVQVANDIAHSEHLDFLVRGAVGSGKSTGLPVHLSVAG
SVLLIEPTRPLAENVFKQLSSEPFFKKPTLRMRGNSIFGSSPISVMTSGFALHYFANNRS
QLAQFNFVIFDECHVLDPSAMAFRSLLSVYHQACKVLKVSATPVGREVEFTTQQPVKLIV
EDTLSFQSFVDAQGSKTNADVVQFGSNVLVYVSSYNEVDTLAKLLTDKNMMVTKVDGRTM
KHGCLEIVTKGTSARPHFVVATNIIENGVTLDIDVVVDFGLKVSPFLDIDNRSIAYNKVS
VSYGERIQRLGRVGRFKKGVALRIGHTEKGIIEIPSMVATEAALACFAYNLPVMTGGVST
SLIGNCTVRQVKTMQQFELSPFFIQNFVAHDGSMHPVIHDILKKYKLRDCMTPLCDQSIP
YRASSTWLSVSEYERLGVALEIPKQVKIAFHIKEIPPKLHEMLWETVVKYKDVCLFPSIR
ASSISKIAYTLRTDLFAIPRTLILVERLLEEERVKQSQFRSLIDEGCSSMFSIVNLTNTL
RARYAKDYTAENIQKLEKVRSQLKEFSNLDGSACEENLIKRYESLQFVHHQAATSLAKDL
KLKGIWNKSLVAKDLIIAGAVAIGGIGLIYSWFTQSVETVSHQGKNKSKRIQALKFRHAR
DKRAGFEIDNNDDTIEEFFGSAYRKKGKGKGTTVGMGKSSRRFINMYGFDPTEYSFIQFV
DPLTGRQIEENVYADIRDIQERFSEVRKKMVENDDIEMQALGSNTTIHAYFRKDWCDKAL
KIDLMPHNPLKVCDKTNGIAKFPERELELRQTGPAVEVDVKDIPAQEVEHEAKSLMRGLR
DFNPIAQTVCRLKVSVEYGASEMYGFGFGAYIVANHHLFRSYNGSMEVQSMHGTFRVKNL
HSLSVLPIKGRDIILIKMPKDFPVFPQKLHFRAPTQNERICLVGTNFQEKYASSIITETS
TTYNIPGSTFWKHWIETDNGHCGLPVVSTADGCIVGIHSLANNAHTTNYYSAFDEDFESK
YLRTNEHNEWVKSWVYNPDTVLWGPLKLKDSTPKGLFKTTKLVQDLIDHDVVVEQAKHSA
WMFEALTGNLQAVATMKSQLVTKHVVKGECRHFTEFLTVDAEAEAEAFFRPLMDAYGKSL
LNRDAYIKDIMKYSKPIDVGVVDRMHLRKPSIGLSSTCNVHGFKKCAYVTDEQEIFKALN
MKAAVGASYGCKKKDYFEHFTDADKEEIVMQSCLRLYKGLLGIWNGSLKAELRCKEKILA
NKTRTFTAAPLDTLLGGKVCVDDFNNQFYSKNIECCWTVGMTKFYGGWDKLLRRLPENWV
YCDADGSQFDSSLTPYLINAVLTIRSTYMEDWDVGLQMLRNLYTEIVYTPISTPDGTIVK
KFRGNNSGQPSTVVDNSLMVVLAMHYALIKECVEFEEIDSTCVFFVNGDDLLIAVNPEKE
SILDRMSQHFSDLGLNYDFSSRTRRKEELWFMSHRGLLIEGMYVPKLEEERIVSILQWDR
ADLPEHRLEAICAAMIESWGYSELTHQIRRFYSWLLQQQPFATIAQEGKAPYIASMALRK
LYMDRAVDEEELRAFTEMMVALDDEFELDSYEVHHQANDTIDAGGSNKKDAKPEQGSIQP
NPNKGKDKDVNAGTSGTHTVPRIKAITSKMRMPTSKGATVLNLEHLLEYAPQQIDISNTR
ATQSQFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQVEYP
LKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDMGLARYAFDFYE
VTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGV
KNM

NT seq 9192 nt +upstreamnt +downstreamnt
atggcaacttacatgtcaacaatctgttttggttcgtttgaatgcaagctaccatactca
ccagcctcttgcgagcatattgtgaaggaacgagaagtgccggcttccgttgatcctttc
gcagatctggaaacacaacttagtgcacgattgctcaagcaaaaatatgctactgttcgt
gtgctcaaaaacggtacttttacgtaccgatacaagactgatgcccagataatgcgcatt
cagaagaaactggagaggaaggatagggaagaatatcacttccaaatggccgctcctagt
attgtgtcaaaaattactatagctggcggagatcctccatcaaagtctgagccacaagca
ccaagagggatcattcatacaactccaaggatgcgtaaagtcaagacacgccccataata
aagttgacagaaggccagatgaatcacctcattaagcagataaaacagattatgtcggag
aaaagagggtctgtccacttaattagtaagaaaaccactcatgttcaatataagaagata
cttggtgcatactccgcagcggttcgaactgcacatatgatgggtttgcgacggagagtg
gacttccgatgtgatatgtggacagttggacttttgcaacgtctcgctcggacggacaaa
tggtccaatcaagtccgcactatcaacatacgaaggggtgatagtggagtcatcttgaac
acaaaaagcctcaaaggccactttggtagaagttcaggaggcttgttcatagtgcgtgga
tcacacgaagggaaattgtatgatgcacgttctagagttactcagagtattttaaactca
atgatccagttttcgaatgccgacaatttttggaagggtctggacggtaattgggcacga
atgagatatccttcggatcacacatgtgtagctggtttacctgtcgaagattgtggtagg
gtagctgcattgatggcacacagtatccttccgtgctataagataacttgccccacctgt
gctcaacagtatgccagcttgccagttagcgatctgtttaagctattgcataaacatgca
agagatggtttgaatcgattgggagcggataaagaccggtttatacatgttaataagttc
ttgatagcgttagagcatctaactgaaccggtggacctgaatctcgagcttttcaatgag
atatttaaatccataggggagaaacagcaagcaccgttcaagaatttaaatgtcttaaat
aatttcttcctgaaaggaaaagaaaatacagctcatgaatggcaggtagctcaattgagt
ttgctcgaattagcaaggttccagaagaacagaactgataacatcaagaaaggtgatata
tctttcttcagaaataaattatctgccaaggcaaactggaatctgtatttgtcgtgcgac
aaccagctggataaaaatgcaaacttcctctggggacaaagggagtatcatgctaagcgg
tttttctcaaacttctttgaggaaattgatccagcaaagggatactcagcatatgaaatc
cgcaagcatccaagtggaacaaggaagctctcaattggtaacttagttgtcccacttgat
ttagctgagtttaggcagaagatgaaaggtgactataggaaacaaccaggggtcagcaaa
aagtgcacgagttcgaaagatggtaattatgtgtatccctgttgttgcacaacacttgat
gatggttcagccattgaatcaacattctatccaccaactaaaaagcaccttgtaattggc
aatagtggtgaccaaaaatttgttgatttaccaaaaggggattcggagatgttatacatt
gccaagcagggttattgttatattaacgtgtttcttgcaatgctgattaacattagcgag
gaggatgcaaaggatttcacaaagaaagttcgcgacatgtgtgtgccaaagcttggaacc
tggccaactatgatggatttggcgaccacttgtgctcaaatgagaatattctatcctgac
gtacatgatgcagaattgcccagaatattggttgaccatgacactcaaacgtgtcatgtg
gttgactcatttggctcgcagacaactggatatcatattctaaaagcatccagcgtgtct
caacttatcttgtttgcaaatgatgaattagaatctgatataaaacattatagagttggt
ggtgttcctaatgctagccctgaacttgggtccacaatatcacctttcagagaaggagga
gttataatgtctgagtcggcagcgctgaaactgcttttgaagggaatttttagacctaag
gtgatgagacagttgctgttagatgagccttacctgttgattctatcaatactatcccct
ggcatactgatggctatgtataataatgggatttttgaacttgcggtgaggttgtggatt
aatgagaaacaatccatagctatgatagcatcgctactatcagctttagccctacgagtg
tcagcggcagaaacactcgtcgcacagaggattataattgatgctgcagctacagacctc
cttgatgctacgtgtgatgggttcaacctacatctaacgtaccccactgcattgatggtg
ttgcaagttgttaagaatagaaatgaatgtgatgataccctattcaaggcgggttttcca
agttacaacacgagcgtcgtacagattatggaaaaaaattatctaaatctcttgaacgat
gcttggaaagatttaacttggcgagaaaattatccgcaacatggtactcatacagagcaa
aacgctctatccactcggtacataaaacccacagaaaaggcagatttgaaagggttatac
aacatatcaccacaagcgttcttgggccgaagcgcccaggtggtcaaaggcactgcctca
ggattgagcgagcgatttaataattatttcaatactaagtgtgtaaatatttcatccttt
ttcattcgtagaatctttaggcgtttgccaacctttgtcacttttgttaactcattatta
gttattagtatgttaaccagcgtagtggcagtgtgtcaggcaataattttagatcagagg
aagtataggagagaaatcgagttgatgcagatagagaagaatgagattgtctgcatggag
ctatatgcaagtttacagcgcaaacttgaacgcgatttcacatgggatgagtacattgag
tatttgaagtcagtaaaccctcagatagttcagtttgctcaagcgcagatggaagaatat
gatgtgcgacaccagcgttccacaccagttgttaaaaatttggaacaagtggtagcattt
atggctttagtcatcatggtgtttgatgctgaaaggagtgattgcgtgttcaaaactctc
aataaatttaagggtgtcctttcctcactggattatgaagttagacatcagtccttagac
gatgtgatcaagaattttgatgagaggaatgagattattgattttgaattgagtgaggac
acaattcgaacttcatcagtgctagatacaaagtttagtgattggtgggatcgacaaatc
cagatgggacatacacttccacattacagaactgaggggcacttcatggaatttacaaga
gcaactgctgttcaagtggctaatgacattgcccatagcgaacacctagactttttagta
cggggagctgttgggtctggaaagtcaactgggttgcctgttcatcttagtgtggccgga
tctgtgcttttaattgaaccaacgcgaccactagcggagaacgttttcaaacagctatct
agtgaaccattcttcaagaagccaacactgcgtatgcgtggaaatagtatatttggctct
tctccaatctccgtcatgactagcggatttgcgctacactacttcgccaataatcgctct
caattagctcagttcaactttgtaatatttgatgagtgtcatgttctggatccttccgcg
atggcgttccgcagtctgctgagtgtttatcatcaagcatgcaaagtattaaaagtgtca
gctactccagtgggaagagaggttgaattcacaacacagcagccagtcaagttaatagtg
gaggacacactgtctttccaatcatttgttgatgcacaaggttctaaaactaatgctgat
gttgttcagtttggttcaaacgtacttgtgtacgtgtcgagctacaatgaagttgacacc
ttggccaagctcctaacagacaagaatatgatggtcacaaaggttgatggcagaacaatg
aagcacggttgcctagaaattgtcacaaaaggaaccagtgcgagaccacattttgttgta
gcaaccaacataattgagaatggagtgactttggacatagacgtggttgtggactttggg
ttgaaagtctcaccgttcttggacattgacaataggagcattgcttacaataaggtgagt
gttagctatggtgagagaattcaaaggctgggtcgtgttggacgcttcaagaaaggagta
gcattgcgcattggacacactgaaaagggaattattgaaattccaagcatggtcgctact
gaggcggctcttgcttgctttgcatataacttgccagtgatgacaggaggcgtttcaact
agtctgattggcaattgtactgtgcgccaggttaaaacaatgcagcaatttgaattgagt
cccttctttatccagaatttcgttgctcatgatggatcaatgcatcctgtcatacatgac
attcttaaaaagtataaacttcgagattgtatgacgcctttgtgcgatcagtctatacca
tacagggcatcgagtacttggttatcggttagtgaatatgagcgacttggagtggcctta
gaaattccaaagcaagtcaaaattgcattccatatcaaagagatccctcctaagctccac
gaaatgctttgggaaacggttgtcaagtacaaagacgtttgcttatttccaagcattcga
gcatcgtccatcagcaaaatcgcatacacattgcgtacagatctcttcgccatcccaaga
actctaatattggtggagagattgcttgaagaggagcgagtgaagcagagccaattcaga
agtctcatcgatgaagggtgctcaagcatgttttcaattgttaacttaaccaacactctc
agagctagatatgcaaaagattacaccgcagagaacatacaaaaacttgagaaggtgaga
agtcaactaaaagaattctcaaatttggatggttctgcatgtgaggagaatttaataaag
aggtatgagtcgttgcagttcgttcatcaccaagctgcgacgtcacttgcaaaggatctc
aagttgaaggggatttggaacaagtcattagtggctaaagacttgatcatagcaggcgct
gttgcaattggtggaataggactcatatatagttggttcacacaatcagttgagactgtg
tctcatcaagggaaaaataaatccaaaagaatccaagccttgaagtttcgccatgctcgt
gacaaaagggctggctttgaaattgacaacaatgatgacacaatagaggaattcttcgga
tctgcatacaggaaaaagggaaaaggtaaaggtaccacagttggtatgggtaagtcaagc
aggaggttcatcaacatgtatgggtttgatccaacagagtactcattcatccaattcgtt
gatccactcactgggcggcaaatagaagaaaatgtctatgctgacattagagatattcaa
gagagatttagtgaagtgcgaaagaaaatggttgagaatgatgacattgaaatgcaagcc
ttgggtagtaacacgaccatacatgcatacttcaggaaagattggtgtgataaagctttg
aagattgatttaatgccacataacccactcaaagtttgtgacaaaacaaatggcattgcc
aaatttcctgagagagagctcgaactaaggcagactgggccagctgtagaagtcgatgtg
aaggacataccagcacaggaggtggagcatgaagctaaatcgctcatgagaggcttgaga
gacttcaacccaattgcccaaacagtttgtaggctgaaagtatctgttgaatatggggca
tcagagatgtacggttttggatttggagcatacatagtagcgaaccaccatttatttagg
agttacaatggttccatggaggtgcaatccatgcacggtacattcagggtgaagaatcta
cacagtttgagcgttctgccaattaaaggtagggacatcatcctcatcaaaatgccgaaa
gatttccctgtctttccacagaaattgcatttccgagctcctacacagaatgaaagaatt
tgtttagttggaaccaacttccaagagaagtatgcttcgtcgatcatcacagaaacaagc
actacttacaatataccaggcagcacattctggaagcattggattgaaacagataatgga
cattgtggactaccagtggtgagcaccgccgatggatgtatagtcggaattcacagtctg
gcaaacaatgcacacaccacgaactactactcagccttcgatgaagattttgaaagcaag
tacctccgaaccaatgagcacaatgaatgggtcaagtcttgggtttataatccagacaca
gtgttgtggggcccgttgaaacttaaagacagcactcccaaagggttattcaaaacaaca
aagcttgtgcaagatctaatcgatcatgatgtagtggtggagcaagctaagcattctgca
tggatgtttgaagccttgacaggaaatttgcaagctgtcgcaacaatgaagagccaatta
gtaaccaagcatgtagttaaaggagagtgtcgacacttcacagaatttctgactgtggat
gcagaggcagaggcagaggcattcttcaggcctttgatggatgcgtatgggaaaagcttg
ctaaatagagatgcgtacatcaaggacataatgaagtattcaaaacctatagatgttggt
gtcgtggatcggatgcatttgaggaagccatcaatagggttatcatctacctgcaatgtg
cacggcttcaagaagtgtgcatatgtcactgatgagcaagaaattttcaaagcgctcaac
atgaaagctgcagtcggagccagttatgggtgcaaaaagaaagactattttgagcatttc
actgatgcagataaggaagaaatagtcatgcaaagctgtctgcgattgtataaaggtttg
cttggcatttggaacggatcattgaaggcagagctccggtgtaaggagaagatacttgca
aataagacgaggacgttcactgctgcacctctagacactttgctgggtggtaaagtgtgt
gttgatgacttcaataatcaattttattcaaagaatattgaatgctgttggacagttggg
atgactaagttttatggtggttgggataaactgcttcggcgtttacctgagaattgggta
tactgtgatgctgatggctcacagtttgatagttcactaactccatacctaatcaatgct
gttctcaccatcagaagcacatacatggaagactgggatgtggggttgcagatgctgcgc
aatttatacactgagattgtttacacaccaatttcaactccagatggaacaattgtcaag
aagtttagaggtaataatagtggtcaaccttctaccgttgtggataattctctcatggtt
gtccttgctatgcattacgctctcattaaggagtgcgttgagtttgaagaaatcgacagc
acgtgtgtattctttgttaatggtgatgacttattgattgctgtgaatccggagaaagag
agcattctcgatagaatgtcacaacatttctcagatcttggtttgaactatgatttttcg
tcgagaacaagaaggaaggaggaattgtggttcatgtcccatagaggcctgctaatcgag
ggtatgtacgtgccaaagcttgaagaagagagaattgtatccattctgcaatgggataga
gctgatctgccagagcacagattagaagcgatttgcgcagctatgatagagtcctggggt
tattctgaactaacacaccaaatcaggagattctactcatggttattgcaacagcaacct
tttgcaacaatagcgcaggaagggaaggctccttatatagcaagcatggcactaaggaaa
ctgtatatggatagggctgtggatgaggaagagctaagagccttcactgaaatgatggtc
gcattagatgatgagtttgagcttgactcttatgaagtacaccatcaagcaaatgacaca
attgatgcaggaggaagcaacaagaaagatgcaaaaccagagcagggcagcatccagcca
aacccgaacaaaggaaaggataaggatgttaatgcaggcacatctgggacacatactgtg
ccgagaatcaaggctatcacgtccaaaatgagaatgcccacaagcaagggagcaaccgtg
ctaaacttagaacatttgcttgagtatgctccacaacaaattgatatttcaaatactcgg
gcaactcaatcacagtttgatacgtggtatgaggcagtgcggatggcatacgacatagga
gaaactgagatgccaactgtgatgaatgggcttatggtttggtgcattgaaaatggaacc
tcgccaaatgtcaacggagtttgggttatgatggatgggaatgaacaagttgagtacccg
ttgaaaccaatcgttgagaatgcaaaaccaacccttaggcaaatcatggcacatttctca
gatgttgcagaagcgtatatagaaatgcgcaacaaaaaggaaccatatatgccacgatat
ggtttaattcgaaatctgcgggatatgggtttagcgcgttatgcctttgacttttatgag
gtcacatcacgaacaccagtgagggctagggaagcgcacattcaaatgaaggccgcagca
ttgaaatcagcccaacctcgacttttcgggttggacggtggcatcagtacacaagaggag
aacacagagaggcacaccaccgaggatgtctctccaagtatgcatactctacttggagtc
aagaacatgtga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (2)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (11)   
   Pfam (11)   
Taxonomy (1)   
   TAX (1)   
All databases (57)   

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