KEGG   Vibrio gazogenes: BSQ33_01400
Entry
BSQ33_01400       CDS       T04933                                 
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
vga  Vibrio gazogenes
Brite
KEGG Orthology (KO) [BR:vga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vga03009]
    BSQ33_01400 (rimO)
Enzymes [BR:vga01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     BSQ33_01400 (rimO)
Ribosome biogenesis [BR:vga03009]
 Prokaryotic type
  ribosomal protein modification factors
   BSQ33_01400 (rimO)
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 DUF5005 TRAM
Other DBs
NCBI-ProteinID: ASA54516
UniProt: A0A1Z2SBF6
Position
1:306933..308342
AA seq 469 aa
MTVHTYTPNQTTTLDTAQKTLTQQESMHNAVTGNRIGFVSLGCPKNLVDSERILTQLRTE
GYDIVSQYQHADLVIVNTCGFIDSAVQESLDVIGEALHENGQVIVTGCLGAREDEIREVH
PNVLGITGPHAYENVLEHVHQFVPRPAHNPYTSLVPDHGVKLTPKHYAYLKISEGCNHRC
TFCIIPSMRGKLVSRPVGDIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFSNGTP
VRQNLKALSEHLSQLGIWVRLHYVYPYPHVDDIIPLMAEGKILPYLDIPFQHASPRVLKM
MKRPGQAERTLERIQQWRNICPQLVIRSTFIVGFPGETEEDFQILLDWLQEAQLDRVGCF
KYSPVEGATANELAEQVPESVKQDRYERFMALQQAISTQKLQQRIGSQMQVLIDEVDQEG
AIGRTYADAPEIDGVVYLNGETGVKAGDLVNVTIEHADEYDLWGSLTAN
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaccgtccatacttatacgccaaatcagaccacgaccctagatacagcacaaaaaaca
ctgacccagcaagaatcaatgcacaatgcagtgacaggcaacagaatcggatttgtctct
ctggggtgtccgaaaaaccttgtcgattcggagcgaattctgacgcaattacgcactgaa
ggatacgatatcgtcagtcagtatcagcatgcggatttagttatcgtcaacacatgcggt
tttattgacagtgccgttcaggagtctctggatgtgatcggagaagcgctgcatgaaaat
ggccaagtcattgtgaccggatgcctcggagcacgcgaagatgagatccgagaagttcac
ccgaatgtcttaggtattaccgggcctcacgcttacgaaaatgtacttgagcatgttcat
cagttcgtgcctcgtccggcacataatccatataccagtctcgtcccggatcatggtgtc
aaactgacaccgaaacactacgcttacctgaaaatatcggaaggctgtaaccatcgctgc
accttctgcatcattccttccatgcgcggtaaattagtcagccgtccggttggagatatc
atcggagaagcagaacgactgaaaaacgccggcgtcaaagagctgctcgtgatcagtcag
gacaccagtgcctatggcgtagatactaaacacagtcttggtttctcaaacggtacccca
gtgagacaaaacctcaaagcactcagtgaacacctgagtcaattgggcatttgggttcga
ctccattatgtttatccttacccgcatgttgatgacatcattccgttgatggctgaagga
aaaattctgccctatctcgatattccgtttcaacatgccagcccgcgcgtattgaagatg
atgaaacggccgggtcaggcagaacgaacgctggaacgcatccagcaatggcgtaacatc
tgtccgcaattggtcattcgttctacctttatcgtcgggttccccggagaaacagaagaa
gactttcaaatcttactggattggcttcaggaagcgcagctcgatcgggtcggatgtttt
aaatactctccggttgaaggcgcaacagccaatgagctggccgaacaggtaccggaatcg
gtcaaacaggatcgctatgagcgttttatggcgttacaacaagcaatcagcacccaaaaa
ctccaacagcgtatcggcagccagatgcaagtgctgatcgatgaagtggatcaagaaggt
gcaattggtcgtacttacgctgacgctccggaaatcgacggtgtggtttatctcaatggc
gaaacgggtgtaaaagccggtgatttggtcaatgtcaccattgaacatgctgacgaatat
gatctgtggggcagcctgacagcgaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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