KEGG   Variibacter gotjawalensis: GJW-30_1_03569
Entry
GJW-30_1_03569    CDS       T05320                                 
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
vgo  Variibacter gotjawalensis
Brite
KEGG Orthology (KO) [BR:vgo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vgo03009]
    GJW-30_1_03569 (rluC)
Enzymes [BR:vgo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     GJW-30_1_03569 (rluC)
Ribosome biogenesis [BR:vgo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    GJW-30_1_03569 (rluC)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: BAT61019
UniProt: A0A0S3PYP1
Position
complement(3640536..3641582)
AA seq 348 aa
MKPLEEKVRALVDALESLPTAVQTVTVTGDENDMRVDRFLEARFPGLSFSHIQRVIRKGE
LRVNGRRADSKDRLKAGQAVRIPPLRVDTPKAPGELTGKGADDLAFLKSITLYEDDDVLV
LNKPFGLAVQGGSGTTRHVDGMLEVMRDRHGQRPRLVHRIDKDTAGCLLVAKTRFAASTL
AKSFRSRDARKVYWALVAGVPRPHQGRISTYLAKEEVERDSFMRVAKHGEEGASHAITYY
AVVETAAQKLAWISLKPVTGRTHQLRAHCAHIKHPIVGDPKYFSIENWQLPGGVQNRLHL
LARRIALPHPRGGMIDVSAPLPPHMQQSWNLLGLDADRYDPIVEAPEK
NT seq 1047 nt   +upstreamnt  +downstreamnt
gtgaagccgctggaggagaaagtccgcgcgctcgtcgatgcgctcgagagtttgccgacc
gccgtgcagaccgtcacggtcaccggcgacgagaacgacatgcgggtcgatcgcttcctc
gaagcgcgctttccggggctgtccttctcgcacattcagcgcgtgatccgtaaaggtgag
ctgcgcgtcaacggacgccgcgccgactcgaaggatcgtttgaaagccgggcaggcggtg
cgcattccgccgctgcgtgtcgacacaccgaaagcgccgggtgagctcaccggcaaaggc
gcggacgatctcgcgttcctcaaatcgatcacgctctacgaagacgacgacgtcctcgtg
ctcaacaagccgttcggcctcgccgtgcagggcggatccggtacgacgcggcatgtcgac
ggcatgctcgaagtgatgcgcgaccgtcacgggcagcgtccgcgactcgtgcaccgtatc
gacaaggatacggccggctgcctgctggttgcgaagacgcgctttgcggcgtcgacgctg
gcgaaaagtttccgctcgcgcgatgcacgcaaggtgtattgggcgctggttgccggtgtg
ccgcgtccgcatcaggggcgcatctcgacctacctcgcgaaagaggaagtcgagcgcgac
agcttcatgcgcgtcgccaaacacggcgaagagggcgcgagccacgcgatcacctactat
gcggtggtcgagacggcggcgcagaagctggcgtggatttcgctcaagcccgttacgggc
cgcacgcatcagctgcgtgcgcattgtgcgcacatcaagcaccccatcgtcggcgatcct
aagtatttctcgattgagaattggcaactgccgggcggcgtgcagaaccgcctgcatctc
ttggcgcgccggatcgcgctgccgcatccgcgcggcggcatgatcgatgtctcggcgccg
ctgccgccgcacatgcagcaatcgtggaatctgctcggcctcgatgccgaccgctacgac
cccattgtcgaggcgccggaaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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