KEGG   Vibrio campbellii: VIBHAR_00657Help
Entry
VIBHAR_00657      CDS       T00589                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vha  Vibrio campbellii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vha00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VIBHAR_00657
Enzymes [BR:vha01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VIBHAR_00657
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VIBHAR_00657
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:644316..645125
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQKLKKLEGQVIRNISRRAKYLL
IETDEGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLTNGKILRYNDPRRFGAWLWSAPN
EPHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAIKQFIMDNKIVVGVGNIYANESLFKSR
IHPTRPAGKLTKKEWQLLVENIKATLEIAIQQGGTTLKDFAQADGKPGYFAQELLVYGKA
GEPCPECGEALQEQKIGQRNTFFCGVCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaagtaagccgaatgggcatcagcccacatatgattggc
caaacgatcaaggcatttgtatttagaaccccgaaactgcgttgggatatcccgcaaaag
cttaaaaagctggaagggcaggtgattcggaatatcagtcgccgcgctaagtatctgttg
atagaaacggacgaaggaactgcgattgttcacttaggtatgtcgggttcactgcgtgtg
ttagatgctgattttcctccagcaaagcacgatcatgtggatctcaaactaactaatgga
aagatactgcgttacaacgatccacgtcgttttggcgcatggctgtggagtgcgcccaat
gagccacatgcagttttaggtcatatgggaccagagccattaactgaagagttcaacgcg
gactacgtagcagagaaagccaaaggtaagcgcgttgcgattaagcagttcatcatggac
aacaaaatcgttgttggagtcggaaatatctacgccaacgaatcattgtttaaatcacgt
attcatcccactcgccctgcaggtaagctaaccaagaaagagtggcaattgctggtggag
aacattaaagccacgctagagatcgctatacagcaaggcggaaccacactgaaagatttc
gcccaagctgatggcaagccaggttacttcgcacaagagctgttagtttacggaaaagcc
ggagagccatgcccagaatgcggcgaagctctccaagagcaaaagataggccaacgtaat
accttcttttgcggagtatgtcagaagtag

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