KEGG   Vibrio campbellii ATCC BAA-1116: VIBHAR_03536
Entry
VIBHAR_03536      CDS       T00589                                 
Name
(GenBank) hypothetical protein
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vha  Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:vha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vha03019]
    VIBHAR_03536
   03009 Ribosome biogenesis [BR:vha03009]
    VIBHAR_03536
   03036 Chromosome and associated proteins [BR:vha03036]
    VIBHAR_03536
Enzymes [BR:vha01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     VIBHAR_03536
Messenger RNA biogenesis [BR:vha03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VIBHAR_03536
Ribosome biogenesis [BR:vha03009]
 Eukaryotic type
  90S particles
   RNase
    VIBHAR_03536
 Prokaryotic type
  rRNA processing factors
   VIBHAR_03536
Chromosome and associated proteins [BR:vha03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     VIBHAR_03536
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ABU72472
UniProt: A7MZA8
Position
I:complement(3588412..3589089)
AA seq 225 aa
MNSPIDKLERKLGYQFKDAGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDIEAVRGIVLSWYNSRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVECDVAGVDKPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaattctccaattgataaactagagagaaagctcggctaccaatttaaggatgctggg
cttatcaacttggcgctgactcaccgcagcgccaacagcaagcataatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcatcgctgatgatctgtaccatcgtttcccg
aaagtgaacgaaggtgacatgagccgtatgcgcgctactttggtacgtgggcacacattg
gcggaactgggtcgtgaattcgatctaggagattatttaaaattaggtccaggtgaattg
aagagtggcggattccgccgagactctattctagccgatgcggtagaagccattattggt
gcgatttaccttgatagtgatattgaagccgtgcgcggcattgtactgagctggtacaac
tcgcgtcttgaggcgatcaagcctggcgtatcacaaaaagatccaaaaactcgcctacaa
gagttcctgcaaggcagaagaaaaccgctgcctgtctacacagtgactaatattaaaggt
gaagcgcacaaccaagagttcacggttgagtgtgacgtagcaggtgtggataagcctgta
atcggtaaaggcaccagccgccgcaaggcagaacaagcggctgcagaaacggcacttgag
caattaacgaatggctga

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