KEGG   Vibrio harveyi: AL538_13035
Entry
AL538_13035       CDS       T04380                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vhr  Vibrio harveyi
Pathway
vhr00260  Glycine, serine and threonine metabolism
vhr00460  Cyanoamino acid metabolism
vhr00630  Glyoxylate and dicarboxylate metabolism
vhr00670  One carbon pool by folate
vhr00680  Methane metabolism
vhr01100  Metabolic pathways
vhr01110  Biosynthesis of secondary metabolites
vhr01120  Microbial metabolism in diverse environments
vhr01200  Carbon metabolism
vhr01230  Biosynthesis of amino acids
vhr01240  Biosynthesis of cofactors
Module
vhr_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:vhr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    AL538_13035 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    AL538_13035 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AL538_13035 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    AL538_13035 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    AL538_13035 (glyA)
Enzymes [BR:vhr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     AL538_13035 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 OKR_DC_1 Aminotran_5
Other DBs
NCBI-ProteinID: AMF98581
UniProt: K5W061
Position
1:2773708..2774958
AA seq 416 aa
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQANVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEDDAKELANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagagactcttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagt
ccacgtgtaatggaagctcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagctgaagcactagcgatcgat
cgtgcatgccaactatttggttgtgagtacgcgaacgtacagcctcactcaggttctcaa
gcaaacagcgcagtttacatggcgcttctgaacccaggcgacacagttctaggtatgagc
ctagcgcacggtggtcacctaactcacggttcaccagtaaacttctctggtaagcactac
aacgttattccttacggtatcgacgaagcaggtcaaatcaactacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttttctgcttactcgcaaatc
gttgattggaaacgcatgcgtgaaatcgcagacaaagttgatgcttacctattcgtagac
atggcacacgttgctggtctaatcgcagcaggcgagtacccgactccagttccacacgct
cacgttgtgacaacaacgacgcacaaaacgctagcgggtcctcgtggtggtcttatcctt
tctaacgaaggtgaagagctgtacaagaagctgaactcagcggtattccctggcggtcaa
ggtggtcctctaatgcacgttattgctggtaaagctgtagcgttcaaagaagcgatggaa
cctgaattcaaagcttaccaagctaacgtagtgaaaaacgcgaaagcaatggttggtcaa
ttccaagagcgtggttacaaaatcgtatctaacggtactgagaaccacctattcctagtt
gacctaatcgacaaagacattacaggtaaagatgcagatgcagcactaggtgcagcaaac
atcacagtaaacaagaactcggttccaaacgacccacgcagcccattcgtaacgtctggt
atccgtgttggtacgccagcaattactcgccgcggcttcactgaagatgacgcgaaagag
ctagcaaactggatgtgtgatgttctagataacatcggcaacgaggaagttatcgaagcg
acgaagcagaaagttctagagatctgtaagcgtctaccagtttacgcatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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