KEGG   Virgibacillus sp. 6R: BKP57_03755
Entry
BKP57_03755       CDS       T04596                                 
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
vig  Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:vig00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vig03400]
    BKP57_03755
Enzymes [BR:vig01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BKP57_03755
DNA repair and recombination proteins [BR:vig03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     BKP57_03755
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD AAA_12 ResIII AAA_30
Other DBs
NCBI-ProteinID: API91048
Position
complement(805473..809177)
AA seq 1234 aa
MVSWTKEQEEAIYTKGSDILVAAAAGSGKTAVLVERIIQKLLDKENPVDIDSLLVVTFTN
AAAQEMRNRVGAALEKALEENPASLHLKKQLSLLQRASISTLHAFCLDVVKQYAYLLDVD
PAFRIANDIEAELIKQEVLDDLFEGWYGATGTEQEEFFQVVDRFSNDRSDADVETLILQL
YDFAVKNPWPDQWLDGLAEAYDIPENMEESELSWLSILKREVREQLRAMEQEIQQAMDIT
RESDGPYHYAETIEQDLTLVQEARRYLNDWQQLHAWMEASTFAKLSGKKAEVNEEKKKQV
KKLRDNYKKRWTNMKQGWFTRNLASHLDDMREMAPVMKQLALLVKAFKSKFQEEKKERAL
VDFSDLEHLCLQVLMEDGTFHAPIPSKVATNFQRQFTEILIDEYQDTNLVQETILSLISD
QIGAGNRFMVGDVKQSIYRFRHAEPSLFIKKYNRFAQSEHLAKRIDLSRNFRSRSQVLTG
TNYLFRQIIDESLGEINYDENAELIYGNKIYDAFPLADPNPELIIIDRETDEKTETAHER
FVDLEKAELEARIYARKIKQWIGQEDGKPQVVDKKTQQQRDVQYRDIVILLRSMTDAPVI
TDELKKQGIPVYAELSAGYFAAIEVKVMISFLKVVDNPRQDIPLAAVLRSPIVGLSEEEL
TTIRLARKKQVYYDALTTYAKENTGPLSDKIALFLNQLRRYRSASRQGALSELIWKIYRE
TAYYDYVGGMPGGRQRQANLRALYDRARTYEMTSFRGLFRFLRFIERMEERGDDLGAARA
LSEQEDVVRIMTIHKSKGLEFPIVLLGGLDKQFNLSDLNKKYLLHKDYGFASKYIDPVKR
ISYPTLYYHALKQEMLRDQLAEEMRVLYVALTRAKEKLVMVGNVASFEKKQEKWESIQNH
PDWVLPTYSRIEAKTYLDWVAPALLRHHANDVLRLGEIGEQVDQEIQQDPSGWDIHILHA
SELVEQDDLEDQKDDQLYQHISDWRPFTLANEQLGEAVQQRLNYTYPYIEAAKSRAKQTV
TELKRQQELKDEYSSDQLITPFQRPIVRRPAFMQKEKKLSAAEKGTIVHKAMQHLPLDRI
LTAAEIEEELEKMVEKEIIGREAVEQMDLSAIEHFYQTPIAQAMIMAPYVQREVPFSLTL
PAPEVYPNWQDDEEQVLIQGVIDAIFPKEDGWIILDYKTDMIHGEWTKAQEKKMLQRYQT
QMKLYRHAVQTIWKQPVLETYLYFFTIQELVRVP
NT seq 3705 nt   +upstreamnt  +downstreamnt
atggtgagctggacaaaagaacaagaagaagcaatttatacaaaaggatctgatattctt
gtcgcagctgcagcgggttcaggtaaaacagcggttttagtagagcggattattcaaaaa
ctattagacaaagagaatcctgtagatattgattctttacttgtagtgacttttacaaat
gcagccgcacaggaaatgcgtaatcgagttggtgcagctttagaaaaagcattggaggaa
aatcctgcttcgttacatttaaaaaagcagttatcgttattacaacgggcatccatctcg
acactacacgcattttgtttagatgtcgtcaaacagtatgcttatttactggacgtggat
ccagcatttcgaattgctaatgatatagaagcagaattgattaaacaagaagttttagat
gacttatttgaaggatggtatggtgcaacggggacagaacaggaagaatttttccaagtt
gttgatcggttttcaaatgatcgaagtgatgctgacgtcgagacgttaattttacaatta
tatgattttgcagtgaaaaatccatggccagatcagtggctggatggcttagcagaagca
tatgatataccggaaaatatggaagaatcggaattaagctggttatctattttaaagcgt
gaagtaagggaacaattacgtgcaatggagcaggaaatacagcaagctatggacataacg
agagaaagtgatggtccatatcattatgcggaaaccattgagcaggatctcactctcgtt
caagaagcaagacggtatcttaatgactggcagcaattacacgcttggatggaagcaagt
acgtttgcaaaactatctggtaaaaaagcagaagtcaatgaagaaaagaaaaaacaagta
aaaaaattacgagataactataaaaagcgttggacaaatatgaagcagggttggtttact
aggaacttagccagtcatttagacgatatgcgtgagatggctcctgttatgaagcaatta
gctttacttgtaaaagcatttaagtctaaatttcaggaagagaaaaaagaacgtgccctt
gttgacttttcagatttagagcatctttgcctacaagtgttgatggaagacggaacgttc
catgcaccaataccatcaaaagtagcaacgaacttccaacgtcaatttaccgaaatattg
attgatgagtaccaagatacaaaccttgtccaagaaactatactatcattaattagtgat
caaatcggtgcaggaaataggtttatggtgggagatgtaaagcaaagtatttatcgtttt
cgacatgcagagccttccttgtttattaaaaagtacaatcgcttcgcacagtctgaacat
cttgctaagcgaatagatttgtcacgtaattttagaagtagatcgcaggttttaacggga
accaattatctgtttagacaaatcattgatgagtcacttggagaaataaactatgatgaa
aatgcagagcttatatatggaaataaaatatatgatgcgtttccacttgcagatccgaac
ccagaattaatcatcattgaccgagaaacggatgaaaaaacagaaacagcgcatgagcgt
ttcgttgatttagaaaaagctgaactagaagcgcgtatttatgctagaaaaataaaacaa
tggatcggtcaagaagatgggaaaccacaagtagtagataaaaaaacacaacaacaacgc
gatgtgcaatatcgcgatattgtcatactgttgcgttcgatgaccgatgcacctgtgatt
acggatgaacttaaaaaacaaggaattcccgtatatgcagaactgtcagctggttatttt
gcagctatagaagttaaagtgatgattagctttttgaaggtagtggacaatccaagacag
gatatccccctagcagctgttttacgatcaccgattgtcggtttaagtgaagaagaattg
acaaccattcgcctagcaaggaaaaaacaagtttattatgatgcattaactacttatgca
aaagagaataccggtccgttatccgataaaattgccctatttttaaaccaactgcgacgc
tatcgatcggcttccagacaaggtgctctttccgaattaatttggaaaatatatcgggaa
acggcttattacgattacgttggtggtatgccaggaggaagacagcggcaagctaatctt
cgtgcgctatatgatcgtgcccgaacatatgaaatgacttcatttcgtggcttatttcgc
tttcttcgttttattgaacggatggaagagcgaggggacgatttaggagccgcaagagca
ttgagtgaacaggaagatgttgtcagaatcatgacgattcataaaagtaagggcttggaa
tttcctatcgttctgcttggtggattggataagcaatttaatttaagcgatttaaacaaa
aaatatttattgcataaagattatggttttgccagtaagtatattgacccagttaaacga
atttcctaccctacactttattatcatgcattaaaacaggaaatgttgcgagatcaacta
gcggaagaaatgcgcgtattatatgtcgctttaacacgagctaaggaaaagctcgtcatg
gttggaaacgtggcatcttttgaaaagaaacaagaaaaatgggaatccattcaaaaccat
cctgactgggtgttgccaacttatagtcgaatagaagccaagacatatctagactgggta
gctcctgctttgcttcgtcaccatgcaaatgacgtgctacgattaggagagattggtgag
caagtggaccaagagattcaacaggatccttcgggctgggatatacacatacttcacgct
agcgagctagttgaacaggatgatctggaagaccaaaaagatgaccagctctatcagcat
atttctgactggagaccatttacgctcgccaacgaacagttaggagaagcggtgcaacaa
cgattgaattatacctatccttatatagaagcagctaaatcaagagcgaaacaaacggta
acggaattaaagcgacagcaggagttaaaagatgaatatagcagtgaccagctgatcact
ccttttcaaagaccgattgtgagacgccctgcttttatgcaaaaggaaaaaaagctatcg
gctgctgaaaaaggtacaatcgtgcataaggcgatgcagcatttacctttagaccgtatt
ttaaccgctgcggaaattgaggaagaactggaaaaaatggtggagaaagaaattatcggt
agagaggcagtagagcaaatggatctttcggcgatcgagcatttctatcaaactccgatt
gctcaagctatgataatggcaccgtatgtgcagcgagaagttccatttagtttaacgctc
ccagcaccagaagtttatcctaactggcaagatgacgaagaacaagtattaattcaaggg
gtaattgatgccattttcccaaaagaggatggatggattatccttgattataaaacggat
atgatacatggagagtggacaaaggcgcaggagaaaaagatgctacaaagatatcaaaca
caaatgaaactttatcggcacgctgtgcaaaccatttggaaacaaccagtattagaaact
tatctgtatttctttacgatacaggagcttgttcgggttccatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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