KEGG   Vibrio natriegens: PN96_01120
Entry
PN96_01120        CDS       T04636                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
vna  Vibrio natriegens
Pathway
vna03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PN96_01120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vna03400]
    PN96_01120
DNA repair and recombination proteins [BR:vna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     PN96_01120
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_14
Other DBs
NCBI-ProteinID: ALR14650
Position
1:complement(224220..226781)
AA seq 853 aa
MKAEQKHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAG
EPIPMAGVPFHAVEGYLAKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEA
LLSERLDNLIAAIYHHNGKFGYATLDVTSGRFQLTEPETEEAMAAELQRTAPRELLFPED
FEPVHLMSSRNGNRRRPVWEFELDTAKQQLNQQFGTKDLIGFGVEHASLGLCAAGCLIQY
VKDTQRTALPHIRSLTFDRQDHSVILDAATRRNLEITQNLAGSTDNTLAAVLDHCATPMG
SRMLKRWLHQPMRCIDTLNNRLDAIGEIKDQSLFADLQPTLKQIGDIERILARLALRSAR
PRDMARLRHAMQQLPELEAITASLTHPYLVKLAQFAAPIDDVCELLERAIKENPPVVIRD
GGVIAEGYNEELDEWRKLADGATEYLEKLESDERERHGIDTLKVGYNNVHGFYIQVSRGQ
SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKQLWEGLFDLLMPNLEQ
LQNLASAVSQLDVLQNLAERADSLDYCRPTLVKEPGIQIQSGRHPVVEQVTSDPFIANPI
ELNPQRKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAQIGSLDRIFTRIGASD
DLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDGLSLAWASAEWLATQIGA
MTLFATHYFELTELPSQLPNLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGV
PKTVIKNARAKLSQLEQLSHGNDSPRPGAVDVANQLSLIPEPSEVEQALSNIDPDEMTPR
QALEELYRLKKML
NT seq 2562 nt   +upstreamnt  +downstreamnt
gtgaaagctgaacaaaaacacactccgatgatgcagcaatacctcaagctaaaggctgag
aaccctgatattttgctgttttaccgcatgggcgatttctacgagctcttctatgatgat
gctaagcgtgcctctcaactgcttgatatctcattgactaaacgtggtgcatctgcagga
gagcctattcctatggcgggtgtgccatttcatgccgtagaaggctatttggccaaactt
gttcagcttggtgagtctgtcgcaatctgtgaacagatcggtgatcccgctaccagtaaa
gggcctgttgagcgtaaagtcgtgcgcattgttactccgggtaccgtcactgacgaagct
cttctctctgagcgcctcgataacttaattgcagcgatttatcaccacaacggtaagttt
ggttatgcgacgctggatgtcacttcaggacgttttcaattaacggaacctgaaaccgaa
gaggcaatggcggctgaactgcaacgcaccgcaccacgtgagttactgtttcctgaagat
tttgaacccgtccatttgatgtcgagccgcaacggtaaccgtcgtcgtccggtatgggaa
tttgaattagataccgcgaaacaacaactgaatcagcaattcggtaccaaagatttgatt
ggctttggcgtggaacacgcgtcactcggattatgtgccgcaggttgtttgatccagtat
gtaaaagacacccagcgtactgcgctaccgcacattcgttctttgacttttgatcgtcag
gatcactctgtcattctggatgccgccacgcgtcgtaacctcgaaattactcaaaacctt
gcaggctcgacagacaatacgttggccgctgttctcgatcactgtgcaaccccaatggga
agccgcatgctcaagcgttggctccatcaaccaatgcgctgcatcgatacattaaacaat
cgccttgatgccatcggtgaaattaaagaccaaagcctatttgccgatcttcagcccact
ttaaaacagattggtgatattgaacgaattttagcccgtctggcgttacgatctgcccgt
cctcgtgacatggctcgtctacgtcacgctatgcagcaattgccagagctagaagccatt
actgcctcactgactcatccatacctcgtgaagctggctcagtttgcagcaccaatcgat
gatgtgtgcgaattactcgaacgtgcaatcaaagaaaaccctcctgttgtgattcgcgac
ggtggcgttatcgccgagggatataatgaagagctggatgagtggcgtaaactcgctgat
ggcgcaacagaatacttagaaaaactcgaatcggacgaacgtgaacgtcatggcattgat
acacttaaagttggttacaacaatgtgcatggcttctacattcaagttagccgtggtcaa
agccatttggtaccgccacactatgtgcgtcgccaaactcttaaaaacgcagaacgctat
atcattcctgagctgaaagaacacgaagacaaagtgcttaactctaagtcaaaagcactc
gcgttagaaaagcagctttgggaagggctgtttgatctgttgatgccgaacctagaacag
ttacagaatttggcctctgcggtttctcaattggatgtactacaaaacctggcagaacgt
gctgattcactcgattactgccgtccgacattagtcaaagaaccaggtatccaaatccaa
tcaggtcgccaccctgttgtagagcaagtcaccagtgacccatttatcgccaacccaata
gagctaaacccacagcgtaagatgttgataattacgggtccgaacatgggtggtaaatcg
acatacatgcgccaaactgcattgatcgcgctgatggctcacatcggttcgtacgttcca
gctgaatcagctcagattggatcgttagatcgtattttcactcgtattggtgcttctgat
gacttagcctccgggcgatcaacgtttatggtggaaatgacggaaacggcgaatattctg
cacaacgcaacgaaaaacagcttagtactgatggatgaaattggtcgaggcaccagtact
tatgatggtctgtctttggcatgggcaagcgcagaatggctggcaacacaaatcggcgcg
atgacactgttcgccacccattactttgagctgactgaactaccaagtcagttgccaaat
ctggccaacgtccacttagacgcggtcgagcatggagacagcattgcgtttatgcacgca
gttcaagaaggtgcagccagcaaatcatacggtctggcagttgctggcttggctggtgtc
ccaaaaaccgtgatcaaaaatgcacgtgcgaagttatctcaacttgaacagttaagtcat
ggtaacgactcccctcgcccgggagcggtcgatgtggcgaatcagctcagccttattcct
gagccaagcgaagtggagcaagctttatcaaacatcgatcccgatgagatgacgcctcgc
caggcacttgaagaactgtatcgtttgaaaaaaatgctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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