KEGG   Vibrio natriegens: PN96_11215
Entry
PN96_11215        CDS       T04636                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
vna  Vibrio natriegens
Pathway
vna00470  D-Amino acid metabolism
vna00550  Peptidoglycan biosynthesis
vna01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vna00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PN96_11215 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PN96_11215 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vna01011]
    PN96_11215 (murD)
Enzymes [BR:vna01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     PN96_11215 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:vna01011]
 Precursor biosynthesis
  Amino acid ligase
   PN96_11215 (murD)
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M Mur_ligase_C NAD_binding_9 DAO TrkA_N NAD_binding_8
Other DBs
NCBI-ProteinID: ALR16504
Position
1:complement(2461222..2462535)
AA seq 437 aa
MERWQNIHSVVVVGLGITGLSVVKHLRKYQPQLVVKVIDTRANPPGAERLPEGVELHSGG
WNAAWLAEADLVVTNPGIALATPEIQSVLGQGTPVVGDIELFAWAVTKPVVAITGSNGKS
TVTDLTGVMAKAAGLSVGVGGNIGVPALDLLDQEADLYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYESMADYRSAKLRIFNHAELAVVNRDDQETFPDHDMPGVTFGCDEQAFGL
ETDGEKTWLLDHGQRVIASDELKLVGKHNLANVLVVLALLKAAGVDCHNTLNTLKNYTGL
THRCQVVEDNQGVKWVNDSKATNIASTMAALSGLELTGKLYLLVGGVGKGADFTPLEPIF
ATLNLQLCCFGKDGDEFLPLHPSATRFDTMEDVIQQISSQLKAGDMVMLSPACASFDQFD
NFMARGDVFAALAKKYA
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggaacgttggcaaaacatacatagtgttgtcgtcgtagggctcggtattaccgggctc
tctgtcgttaaacacctaagaaaatatcaaccacagctggtggttaaagtcattgatact
cgagctaatcctccgggggctgaacgccttcctgaaggggttgaactgcacagcggtggc
tggaatgccgcgtggcttgcagaggctgacttggtggtgacgaaccctggtatcgcactt
gcgacgcctgaaattcagtctgtactaggccagggaacccccgttgtcggtgatattgaa
ctgtttgcctgggcagtcactaagcccgtcgttgcaattaccggctcaaacggtaaaagc
acggtaacagatttgactggcgtaatggcaaaagccgctgggttaagcgttggtgttggc
ggaaatattggcgttcctgcactcgatctacttgatcaagaagcagacttgtatgtgctt
gaactttctagcttccagctggaaaccacgtctagcctcaagttaaaagcggcagcgttt
ctgaatctttctgaagatcatatggatcgctatgaaagcatggccgactaccgatcagca
aaattgcgtatttttaatcatgctgagcttgcggtagtgaatcgagatgatcaggagacc
ttcccagatcatgacatgcctggggttacctttggttgcgatgagcaagcatttggttta
gaaaccgatggtgagaaaacctggttacttgatcacggccagcgcgtgattgccagtgat
gaactcaagcttgtcggtaagcacaatttagcgaacgtactggttgtattagcactgctt
aaggctgcgggtgttgattgtcacaacacattgaatacactaaaaaattacaccggactg
acacaccgttgccaggttgttgaagataatcaaggtgttaaatgggtcaatgattccaag
gcaaccaatattgcgagcactatggcggcactatcggggttggagctgactggcaagttg
tatctactggttggtggtgttggtaaaggcgcagatttcactccattagaaccgattttc
gcgacgctcaatttacagttgtgctgctttggaaaagatggtgatgagtttttaccattg
catccatctgcgactcgtttcgatacgatggaagatgtgattcagcaaatatcttcacag
ttaaaagcgggtgatatggtgatgctctctcctgcatgtgctagctttgatcaattcgac
aactttatggcaagaggtgatgtattcgccgcgcttgctaaaaaatacgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system