KEGG   Vibrio nigripulchritudo: VIBNI_A2714
Entry
VIBNI_A2714       CDS       T02871                                 
Symbol
mrdA
Name
(GenBank) Penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
vni  Vibrio nigripulchritudo
Pathway
vni00550  Peptidoglycan biosynthesis
vni01100  Metabolic pathways
vni01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vni00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    VIBNI_A2714 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    VIBNI_A2714 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vni01011]
    VIBNI_A2714 (mrdA)
Enzymes [BR:vni01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     VIBNI_A2714 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:vni01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   VIBNI_A2714 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer SURF1
Other DBs
NCBI-ProteinID: CCO58761
UniProt: U4K855
Position
1:2879066..2880946
AA seq 626 aa
MRRQRTQIRDYTAESALFSRRALVAFAGIVILMGVLLANLYNIQVNQFQDYKTRSNDNRI
KVVPIAPNRGLIYDRNGILLAENRPIFSLEITPEKIKNIDETIVQLRTFLDISDERVERF
HKERKRTRRFKSVPLLNQLTEEQVALFSVNQHRFPGVEVNATLKRFYPYGKVLTHVLGYV
SRINDRDLQRLEREDKAANYQATRDIGKLGIERFYEDVLHGTAGYQEVEVNSRGRIIRTL
KYVPPIPGKDIVLNLDIRLQQYLYKLLDGRRGSAILLDPSDNGVLAMLSSPSYDPNAFVH
GISGKDYRALLNDKDRPLVNRATLGIYPPASTVKPFISVAALQEKVITTKTTRNDPGYWR
IPNSKTRPFRDWLRWGHGRVDILKSIEESVDTFFYQIAYDMGIDRISTWMMLFGFGDFTG
IDIHEESKANMPTREWKMARHRQPWYQGDTIPVGIGQGYWTATPMQIAKATSVLINRGEV
IAPHLLRATIDKSQEPHVTTAAPIETYPPIQGVSKRYWDVALEGMRLANHGKKGTARRAF
TTAKYVTGGKSGTAQVFGLKEDEEYNAEELAEHLRDHALYTGFAPFEDPEVILTIVLENA
GGGSTHGAPVARRIFDHVLIKSKEGN
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgagacgtcagcgcacccaaatcagagattacaccgccgagtccgccttattttcccgt
cgcgcactggttgcatttgcaggcatcgtgattttaatgggtgtgctactggctaacctc
tacaatattcaggttaaccagtttcaggattacaaaacccgctccaatgacaatcgcatc
aaggtcgtccctatcgccccaaaccgtgggcttatatacgataggaacggaattttgctg
gctgaaaaccgcccgattttcagcctggagatcacgcctgaaaagatcaaaaacattgat
gaaacaatcgtccaactgcgtacctttctggatatcagtgacgagcgtgtagaacgcttc
cacaaggagcgaaaacgcacccgacgctttaaatccgtccctttactgaaccagctaacc
gaagaacaagtcgcactcttctcggtgaatcagcatcgttttcccggcgttgaagtaaat
gccactctgaagcgattctacccatatggaaaagtattaactcatgtgcttggctacgtt
tctcgaattaacgatcgagatttgcagcgcttagaacgtgaggataaagccgctaactac
caggcgactcgtgatattggcaagcttggtattgaacgcttttacgaagatgttctgcac
gggactgccggctatcaggaagtcgaagtaaacagccgtggacgcataatccgaacgcta
aaatacgtgccgcccatcccaggtaaagatatcgttttaaacctggatatcagacttcag
caatatctgtacaagctgcttgatggtcgtcgtggctctgcgattttgctcgaccctagt
gataatggggttctggcaatgttatccagccctagttacgacccgaacgcatttgtgcac
ggtatttctggcaaagattatcgggcgctgctgaacgacaaagaccgcccgctggtcaac
cgcgcaacgttggggatctaccctcctgcctcaacggttaagccttttatttctgttgcc
gcgctgcaagagaaagtcattaccaccaaaactacgcgtaatgacccgggttactggcgt
atccctaattccaaaactcgtccatttcgtgactggctgagatggggacacggccgggta
gatattctcaaatccattgaagaatcggtagataccttcttctaccaaattgcgtatgac
atgggcatcgaccgcatttccacctggatgatgctgtttggttttggtgacttcacaggc
attgatatccacgaagaaagtaaagccaatatgccaacccgggaatggaaaatggcaaga
caccgccagccttggtatcagggtgacaccatcccagtgggtattggtcagggctactgg
accgctacaccaatgcagattgctaaagccacgtccgtgctaattaaccgaggtgaggta
atcgcccctcatttgctacgagcgaccattgataaatcacaagaacctcacgtgacaaca
gcggcgcctattgagacttaccctcctattcaaggggtatctaaacgctactgggatgta
gcacttgaaggaatgagactcgcgaaccacggtaaaaaaggcaccgcaaggcgtgcattc
accactgcgaaatacgtgacaggtggcaaatcaggaacagcgcaagtatttggtttgaaa
gaagacgaagaatacaacgcagaggaactggcagagcatttgcgagatcacgcgctttac
actggtttcgcaccatttgaagatcctgaagtgatattaaccatcgtactagaaaacgca
ggtggtggttctacacacggtgcacctgttgcacgacgcatattcgatcacgttttaatt
aaaagtaaagaggggaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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