KEGG   Vibrio nigripulchritudo: VIBNI_B0346
Entry
VIBNI_B0346       CDS       T02871                                 
Symbol
clpB
Name
(GenBank) Chaperone protein clpB
  KO
K11907  type VI secretion system protein VasG
Organism
vni  Vibrio nigripulchritudo
Pathway
vni03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vni00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VIBNI_B0346 (clpB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vni02044]
    VIBNI_B0346 (clpB)
Secretion system [BR:vni02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VIBNI_B0346 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_16 AAA_5 ClpB_D2-small AAA_22 AAA_7 AAA_14 bpMoxR TniB AAA_18 AAA_25 NACHT DUF815 Clp_N Rad17 SLFN-g3_helicase Sigma54_activat nSTAND1 ResIII AAA_6 SRP54 DinB_2 Flagellin_N HSP70
Other DBs
NCBI-ProteinID: CCO60165
UniProt: U4KBD5
Position
2:378269..380869
AA seq 866 aa
MIRIELPTLISKLNDQSKLALEQAASLCLEHEHSEVTFEHYLHVLLDNPLSDVREILRSG
NTDHHEVQDLVHGAFPRETGHDTYPVFSPLLIELLQDAWLLASTEMNLDHLRSGVIFLTA
IMRPDRYLPLPLANKLQSLNRETLRREFFNILKDSSETPVEESTGKKSKAPVGNDGQRAL
DKYCANVTAQARNQELDPVLCRDEEINLMIDILCRRRKNNPIVVGDAGVGKSAVVEGLAN
RIVDGKVPDKLKNIELMSLDLGLLQAGAAVKGEFEKRLKSIIDEVKSSPTPIILFIDEAH
TLIGAGNQEGGGDAANLLKPALARGELCAVAATTWKEYKKYFEKDPALSRRFQLVKLDEP
SADQTVDILRGLCEVYEKNHQVLISDSALKAASHLSARYVSGRQLPDKAIDVLDTACARI
SINLSTPPSRMSELETLQHQYELERRMLERQVQIGQKIDEERLATLIAKDEECKAEYQET
EQAWQKQRDLINEMIKLRTTLLSDDQSEDDLAETKQALEALYEQLDQTPFKDRLIHPEVD
EQQVAEVIADWTGVPIDQMNTDELTKLTHLPEILENAIKGQDVAINRIHKHLLTARADLR
RPGRPKGAFLLVGPSGVGKTETVVQLAEELYGGKRFLTTINMSEYQEKHTVSRLIGSPPG
YVGFGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADGEGRLIDCQNI
VFFLTSNLGFQTIVDYAERTDEMDDALYPELAAFFKPALLARMETVPYLPLGEEVMEKIV
RGKLSKLETTLTERYKATVDIASSVIEEILSRTTRSENGARMLEAIIEGQMLPPISLALL
EKLANQETVTHIAISAEDGEFIGKVE
NT seq 2601 nt   +upstreamnt  +downstreamnt
gtgattcgaatcgaacttcctacattaatcagtaaactgaacgaccaaagcaaactggct
ctggagcaagctgcctcactgtgccttgaacacgaacactccgaagtgacgttcgagcac
tacttgcatgtgttactggacaatccactcagtgatgtgcgcgaaattctgcgcagcggc
aatacagaccatcacgaagttcaggatttggtgcatggcgcgtttccgcgtgaaacgggg
cacgatacttatccggttttctcgccattgctgattgaattgctgcaagatgcctggttg
ttggcatcgacggaaatgaatctggaccacctccgctccggtgtaattttcctgaccgcc
atcatgcgtccggatcgctatctgccgttgcctttggcgaacaaactccagtctttgaat
cgcgagacccttcgccgtgagttcttcaacattttgaaagactcttctgaaactccggtt
gaagaaagtacaggtaagaaaagcaaagcacctgtcggcaacgacggtcagcgtgcgctc
gataaatactgcgcaaacgtcactgcgcaagcgcgcaatcaggaacttgaccctgtgctg
tgccgagatgaagagatcaatctgatgatcgacatcctctgccgtcgccgcaagaacaac
ccgattgtagtgggtgatgctggtgtcggtaaaagtgcggtggttgaaggtttagccaat
cgcattgtggacggaaaggtgcccgataagctgaaaaacattgaactgatgagcttagat
ttgggcttgctgcaagcgggggctgcggtaaaaggcgagtttgaaaagcgccttaaatcc
attattgatgaagtgaaatcgtcgccaacgccgatcattctgttcatcgacgaagcacac
acgctgattggagcgggcaaccaagaagggggaggcgatgccgccaacctgttgaagcct
gcgctggcgcgtggcgaattgtgcgccgtggctgccactacctggaaagaatacaagaaa
tacttcgaaaaagatcctgctctgagtcgtcgtttccaactggtgaagctggatgaaccg
tctgcggatcaaactgtcgatatccttcgcggcttgtgcgaagtgtatgagaagaatcat
caggttctgatttcagacagcgcattaaaagccgcgtcgcacctttctgctcgctacgtt
tcgggcagacaactgccggacaaagcaattgacgtacttgataccgcgtgtgcgcgtatc
tctatcaatctgagtacgccgccatctcgcatgtccgagctggaaaccttacagcatcaa
tacgagttagagcgtcgcatgctagagcgtcaggttcagattggtcagaaaatagatgaa
gagcgtcttgccacattgatcgccaaagacgaagagtgcaaagctgaatatcaggaaacc
gaacaagcctggcagaaacagcgcgatttgatcaacgagatgatcaaactgcgaacaaca
ttgctcagtgatgaccagtcggaagacgaccttgcagagaccaagcaagcattagaagct
ctatacgaacagcttgatcaaacccctttcaaggatcgtctgattcacccagaagttgac
gaacagcaggttgcggaagtgattgccgactggactggagtgccaattgatcaaatgaat
accgatgagctgaccaagctgacgcaccttccagagattctggagaacgccatcaaaggt
caggatgtcgccatcaatcgcattcacaaacacctgctgaccgctcgtgccgatttaaga
cgcccaggaagaccaaagggcgccttcctattagtcggaccaagtggtgtgggtaaaacc
gaaaccgtggtgcaactggcagaagagctgtacggcggtaaacgcttcctgaccaccatc
aatatgtcggaatatcaagagaagcacacagtctccagactgattggttcgcctccgggc
tatgtaggctttggtgaaggcggtgtgctgactgaagcgattcgcaagatgccgtattca
gtcgtgttgctggatgaagtggagaaagcccatccagaagtgctaaacctgttctatcag
gcgttcgacaagggtgaactggcggatggagaaggtcgtttgattgactgccagaacatt
gtgttcttcctgacgtctaaccttggcttccagaccattgttgattacgccgagcgcacc
gacgaaatggacgacgcgctctacccagagctggcggcattcttcaaaccggctttgctc
gcccgtatggaaacggtgccgtatctgccgctgggtgaagaggtgatggagaagattgtt
cgcggcaagctgagcaagctcgaaaccaccttaaccgaacgctacaaagcgacggtcgat
attgcttccagcgtgatcgaagaaatcctttcccgaactacacgttcagaaaatggcgct
cgcatgcttgaagccatcatcgaagggcagatgttaccacccatttctctggcgttactt
gagaaactggcgaaccaagagactgttactcacatagccatttctgccgaagacggcgaa
ttcatcgggaaggtggaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (34)   

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