KEGG   Vibrio owensii: A9237_07275
Entry
A9237_07275       CDS       T04844                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vow  Vibrio owensii
Pathway
vow03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A9237_07275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vow03400]
    A9237_07275
Enzymes [BR:vow01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     A9237_07275
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A9237_07275
DNA repair and recombination proteins [BR:vow03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A9237_07275
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn_Tnp_IS1595 zinc-ribbons_6
Other DBs
NCBI-ProteinID: AQW57931
Position
1:complement(1620616..1621425)
AA seq 269 aa
MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQELKKLEGQVIRNISRRAKYLL
IETDEGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLSNGKVLRYNDPRRFGAWLWSAPN
EPHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAVKQFIMDNKIVVGVGNIYANESLFKSR
IHPTRPAGKLAKKEWRLLVENIKATLEIAIQQGGTTLKDFAQADGKPGYFAQELLVYGKA
GEPCPECGEALQEQKIGQRNTFFCGECQK
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaagtaagccgaatgggcatcagcccacatatgattggc
caaacgatcaaagcatttgtattcagaactccgaagctgcgttgggatatcccgcaagaa
cttaaaaagctagaagggcaggtgattcgtaatatcagtcgccgcgctaagtatctgttg
atagaaacagacgaaggaactgcgattgttcacttaggtatgtcgggctcattgcgtgtg
ttagatgctgattttcctccagcaaagcacgatcatgtggatctcaaactaagcaatggc
aaagtgctgcgctacaacgatccacgtcgttttggcgcatggctgtggagcgcgcccaat
gagccacatgcagttttaggtcatatgggaccagagcctttaaccgaagagttcaacgcg
gactacgtagcagagaaagccaaaggtaagcgtgttgcggttaagcagttcatcatggac
aacaaaatcgtcgtcggagtcggaaacatctacgccaacgaatctttgtttaaatcacgc
atccatcccactcgccccgcaggtaagctagccaagaaggagtggcgattgctggtggag
aacatcaaagccacgctagagatcgccatccaacaaggcggaaccacactgaaagacttt
gcccaagcagatggcaaaccaggttacttcgcacaagagttattagtttacggaaaagcc
ggagagccatgcccagaatgcggcgaagctctccaagaacaaaagataggccaacgtaat
accttcttttgtggggaatgtcagaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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