KEGG T00120: VP0020

Vibrio parahaemolyticus RIMD 2210633: VP0020

Entry

VP0020 CDS T00120

Gene name

malS

Definition

periplasmic alpha-amylase

Orthology

K01176

alpha-amylase [EC:3.2.1.1]

Organism

vpa Vibrio parahaemolyticus RIMD 2210633

Pathway

vpa00500	Starch and sucrose metabolism
vpa01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:vpa00500]

SSDB

Motif

Pfam:

Alpha-amylase DUF4434

Other DBs

NCBI-GI:

28896794

NCBI-GeneID:

1187476

UniProt:

Q87TP9

Position

I:complement(17066..19150)

AA seq 694 aa
MKKTILALSIGLLGACSQIPENAIVLSVGDDTAVFEPNSDGLLVAEQKLEKGNYTFTIAD
SKQTCGNSFALAEESRIKFNTPLKMDNCATDTSMPLRIFKANTYLFTLNPDTNELTVKIK
PKQSQDITYSCPVATDTAKTINVAQTFTDGTVVRDALTGQEATVANGSVTMQPGPMSQGL
LLLEEVDQQAEKPFSWDNATVYFVMTDRFYNGNPDNDNSYGRSKDGKYEIATFHGGDLAG
LTKKLDYIESLGVNAIWITSPLEQIHGWVGGGDKGDFKHYGYHGYYHQDWTKLDANMGTE
DELRAFIDTAHKKGIRVVWDVVMNHTGYATLADMQEFGFGQLYLDDQEAKEVLGEKWTDW
QPKSGQSWHSFNDYIKYGDSEAWEKWWGKDWIRTDIGDYDAPGYNDITMSLNYLPDLKTE
STQKTGLPNFFRNKNTNAQDELKTPREHLITWLSDWVRDYGIDGFRVDTAKHVEMEAWAE
LKASTTQALAEWKQNHPDKALDDLPFWMTGEVWAHSVVKSPYFDNGFDSIINFEFQSDVA
PKALKCFAQLDNDYRRYAERINSDPEFNVLSYLSSHDTQLFWSARSRSFDDQARAANALM
LAPGAVQIYYGDEIARDFGVTGSDPTQGTRSDMPWDKIHGEREDLLQHWQKLGKFRQRHP
AVAQGKHITRNQEGYYAFERQYQDDKVLIVYTGE

NT seq 2085 nt +upstreamnt +downstreamnt
atgaaaaaaacaattctcgcactctctatcggcctactgggcgcctgcagccaaattcca
gaaaatgccatcgtattaagcgttggagacgatactgccgtcttcgaaccaaactcagac
ggtttactcgtcgcagagcaaaaactagaaaaaggcaactacacctttaccattgccgac
agcaaacaaacctgtggcaacagctttgcgctagcggaagaaagtcgcatcaaattcaat
acaccattaaaaatggataactgtgcaaccgacacatctatgccgctgcgcattttcaaa
gccaatacctacctcttcacgctcaatccagacaccaatgagctaaccgttaaaatcaaa
ccaaaacaaagtcaggacatcacctattcttgccctgttgcaaccgacacagctaaaacc
atcaacgtagcccaaacctttactgatggcactgttgttcgtgacgccttaaccgggcaa
gaagccaccgtcgccaatggcagcgtaaccatgcaaccaggcccgatgagccaaggtcta
ttactgttagaagaggttgatcagcaagccgaaaaacctttcagctgggacaacgcaacg
gtgtattttgtcatgactgaccgcttctataacggcaacccggacaacgacaacagctac
ggtcgcagcaaagacggaaaatacgagattgctaccttccatggtggtgacttagcgggt
ctgacgaaaaaactcgattacatcgaatccctcggtgtgaatgccatctggataacttca
ccactggaacaaatccacggctgggttggcggcggcgataaaggcgacttcaagcactac
ggctaccacggctactaccaccaagattggaccaagcttgatgccaacatgggtaccgaa
gatgagctgagagccttcatcgataccgcccacaagaaaggcatccgtgtagtctgggat
gtggtcatgaaccacactggctacgcaacattagccgacatgcaggaattcggctttggt
caactttaccttgatgaccaagaagccaaagaagtccttggtgaaaaatggaccgactgg
caaccaaaatcgggacaaagctggcacagcttcaacgactacatcaaatacggtgatagt
gaagcgtgggaaaaatggtggggcaaagattggattcgcaccgacattggcgattacgat
gcgccgggatacaacgacatcaccatgtctttgaactacctaccggatctcaaaaccgaa
tcgacgcagaaaaccggactaccaaacttcttccgcaataaaaacaccaatgcgcaagat
gagttgaaaaccccacgagaacatctgatcacatggctatcggattgggtacgtgattac
ggcattgatggcttccgcgtcgataccgccaaacacgttgagatggaagcgtgggcagag
ctcaaagcaagtaccactcaagccctcgccgaatggaaacaaaaccaccccgacaaagca
ctagacgatctgccattttggatgaccggcgaagtgtgggcacacagcgtagtgaagagc
ccgtatttcgataacggcttcgattcgatcatcaacttcgagttccaatctgacgtggca
ccaaaagcgctaaagtgtttcgctcaacttgataatgattaccgccgctatgcagagcgt
attaactccgatcctgaattcaacgtgttgagttacctgtcttcgcacgatactcaactg
ttttggtcggcacgcagccgcagctttgatgaccaagctcgcgccgccaatgcgttaatg
ctggcaccgggtgcagtacaaatctactacggcgatgagattgcccgtgactttggcgtg
actggatccgatccgacccaaggtacacgttccgacatgccatgggacaagattcatggc
gagcgtgaagacttactacaacattggcagaaattgggcaaattccgtcaacgccaccca
gcggttgctcaaggtaagcacatcactcgtaatcaagaaggctactacgcattcgaacgc
caataccaagacgacaaagtactgattgtttacactggcgaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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