KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0189Help
Entry
VP0189            CDS       T00120                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vpa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VP0189
Enzymes [BR:vpa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VP0189
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VP0189
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:200912..201721
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQELKLLEGQVIRNIRRRAKYLL
IDTDQGTAIVHLGMSGSLRVLDADFPAAKHDHVDLKLTNGKVLRYNDPRRFGAWLWCAPG
ESHAVLEHMGPEPLTDAFNSEYIADKAQGKRVAVKQFIMDNKVVVGVGNIYANESLFKSR
ILPTRQAGQVTPQEWVLLVENIKATLKIAINQGGTTLKDFAQADGKPGYFAQELLVYGKA
GEPCPECGEPLQELKIGQRNTFFCNECQQ
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaagtaagccggatgggtattagtccacatatggttgga
caaacgattaaggcatttgtttttcgcacacccaaactgcgctgggatatcccgcaagag
cttaagcttttggaagggcaggttattcgtaatattcgtcgtcgcgccaagtacttattg
attgatactgaccaaggtacagcgattgttcaccttggcatgtctggatcattgcgcgta
ctcgacgctgacttccctgcggcaaagcacgatcatgttgaccttaaactcaccaatggc
aaagtgttacgctacaacgaccctcgacgctttggtgcttggctatggtgcgctcctggt
gagtcccatgcggtacttgagcatatgggaccagagcctctaactgatgcgtttaatagc
gagtacattgccgataaagcgcaaggcaagcgtgtcgcggtaaagcagttcatcatggac
aacaaagtcgtggtcggtgtggggaatatttacgccaatgaatctctgtttaaatctcgt
attctcccaacccgacaagcaggtcaagtgacgccccaagaatgggtactgttagtggaa
aacatcaaagccacgctaaaaattgccattaaccaaggtggtacgactttaaaagacttc
gctcaagccgatggcaagccgggttattttgctcaagaacttctagtgtatggaaaagcg
ggtgaaccttgcccagaatgtggagagccgcttcaagagctaaaaattggccaacgtaat
accttcttctgtaatgagtgccagcaatag

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