KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0500
Entry
VP0500            CDS       T00120                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VP0500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpa03400]
    VP0500
Enzymes [BR:vpa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     VP0500
DNA repair and recombination proteins [BR:vpa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VP0500
 Prokaryotic type
     VP0500
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: BAC58763
UniProt: Q87SC4
Position
1:515261..515941
AA seq 226 aa
MNQSPTWHDVIGEEKKQSYFVDTLNFVEAERAAGKAIYPPAKDVFNAFRFTEFNDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQHGVVFLLWGSHAQKKGRFIDRSKH
HVLAAPHPSPLSAHRGFLGCKHFSQANQLLASQGKEPINWHLPLTV
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaatcagtcacccacttggcacgatgtgatcggcgaagagaaaaagcagagctacttt
gtagacacgttgaattttgttgaagcagaacgagcagcaggcaaagcgatttatccgcca
gcaaaagatgtttttaacgcatttcgtttcacggagtttaacgatgtgaaagtggtgatc
ttaggacaagacccataccacggtccaaatcaggcgcatggtttgtgcttctcagtgctt
cctggaatcaaaacgccaccgtcgctcgtgaacatgtataaagaattggctcaagatatc
gaaggattccagatccctcagcacggattcttgcaaagctgggcagagcaaggcgtattg
ttgctcaatacggttttgacggttgagcaaggcaaagcgcactcacactctaaaacaggg
tgggaaacattcacagaccgagtgattgaagcgataaaccagcatcagcatggggtcgtg
ttccttttatggggttctcacgctcagaagaaaggacgtttcatcgaccgctcgaagcac
catgtattagccgcgccgcatccatcgccattgtctgctcatcgagggttcttgggttgt
aagcatttctcccaagcaaaccaattacttgcttcgcaaggaaaagagccaatcaactgg
catttaccgttaacggtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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