KEGG T00120: VP0605

Vibrio parahaemolyticus RIMD 2210633: VP0605

Entry

VP0605            CDS       T00120

Name

(GenBank) conserved hypothetical protein

K06941

23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]

Organism

vpa Vibrio parahaemolyticus RIMD 2210633

Brite

KEGG Orthology (KO) [BR:vpa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vpa03009]
    VP0605
Enzymes [BR:vpa01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     VP0605
Ribosome biogenesis [BR:vpa03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VP0605

SSDB

Motif

Pfam:

RlmN_N Radical_SAM FRP Fer4_12 Radical_SAM_2

Other DBs

NCBI-ProteinID:

BAC58868

UniProt:

Q87S19

Position

1:629662..630789

AA seq 375 aa
MTTEKINLLDFDRKGMRQFFAEELGEKAFRADQVMKWIYHFGVDDFDNMTNINKKLREKL
QHKCEIKAPTVAEAQHSSDGTIKWAMKVGDQDVETVYIPEEDRATLCVSSQVGCALECKF
CSTAQQGFNRNLKVSEIIGQVWRAAREIGLQKETGRRPITNVVMMGMGEPLLNMKNLIPA
LEIMLDDLGFGLSKRRVTVSTSGVVSGLDQMTGKIDVALAISLHAPNDKLRSEIMPINDR
WDIQDFLASVRRYIASSNANRGKVTVEYVLLDHVNDDMGHARELAELMKDTPCKINLIPF
NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTVRKTRGDDIDAACGQLVGDVIDRTKRTAA
LKAARGAETIDVKAV

NT seq 1128 nt +upstreamnt +downstreamnt
atgactactgaaaaaatcaatctactcgactttgatcgcaaaggcatgcgtcagtttttc
gcggaagaactaggcgagaaagcgtttcgtgctgatcaggttatgaagtggatctaccat
ttcggtgttgatgacttcgacaacatgacgaacatcaacaagaaactacgtgaaaaactg
cagcacaagtgcgaaattaaagccccaacggttgcagaagctcagcactcttcagacggc
acgattaagtgggcaatgaaggtgggtgaccaagacgtagaaacggtttacatcccagaa
gaggatcgcgcgacgttgtgtgtatcttctcaggtaggttgtgcgttggagtgtaagttc
tgttcgaccgctcaacagggcttcaaccgtaacctaaaagtatctgaaatcatcggtcag
gtgtggcgtgctgcacgtgaaatcggtttgcaaaaagaaactggtcgtcgtccaatcact
aacgtcgtaatgatgggtatgggtgagcctcttctaaacatgaagaacctaatccctgcg
ctagaaatcatgcttgatgatcttggttttggtctttctaaacgtcgcgttactgtatca
acttcaggtgtggtttctggtcttgatcagatgacaggtaagattgacgtcgcattggcg
atctccctacatgcgccaaacgataagctacgtagcgaaatcatgccaatcaacgatcgt
tgggatattcaagacttcttagcgtcagttcgtcgttacatcgcatcttcgaacgcaaac
cgtggcaaagtaacagtcgagtacgtgttgcttgatcatgtgaacgatgacatgggtcac
gcacgcgagctggctgagctgatgaaagacacaccatgtaagatcaacctgattccgttt
aacccgtacccaggttctccgtacaagaagccaagcaactcacgtattgaccgattccaa
aaaacattgatgcaatacgagcatacggtgacggttcgtaaaacacgtggtgatgatatt
gatgcggcatgtggtcagttagtcggtgacgttattgaccgtactaaacgtactgcggct
ttaaaagctgcgcgcggtgcagaaaccatcgacgtaaaagcggtataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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