KEGG T00120: VP0847

Vibrio parahaemolyticus RIMD 2210633: VP0847

Entry

VP0847 CDS T00120

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

vpa Vibrio parahaemolyticus RIMD 2210633

Pathway

vpa00020	Citrate cycle (TCA cycle)
vpa00310	Lysine degradation
vpa00380	Tryptophan metabolism
vpa01100	Metabolic pathways
vpa01110	Biosynthesis of secondary metabolites
vpa01120	Microbial metabolism in diverse environments

Module

vpa_M00009	Citrate cycle (TCA cycle, Krebs cycle)
vpa_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:vpa00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:vpa00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:vpa00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

28897621

NCBI-GeneID:

1188344

UniProt:

Q87RF0

Position

I:877572..880397

AA seq 941 aa
MHNGVMKAWLESSHLAGANATYVEDLYELYLSDPDLVSEEWKRVFEGLPKPSEEVAEQPH
SRVRDYFRRLARETKHYNVQVSDPDVDAKQVKVLQLINAYRFRGHEAAELDPLGLWQRPP
VAELDPAFHNLTEDDFEETFNVGSFAVGQETMKLKDIYAALKKTYCGSIGAEYMHMTDTE
QKRWIQQRLESVVGQPSFNQDEKRTFLEELTAAEGLERYLGAKFPGAKRFSLEGGDALIP
MTKELIRHAGKSGMREVVIGMAHRGRLNMLVNVLGKKPQDLFDEFAGKHDETWGTGDVKY
HQGFSADFATPGGDVHLALAFNPSHLEIVNPVVIGSVRARQDRLGDNHGSKVLPITIHGD
SAIAGQGVVAETFNMSLARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCTDIAKMVQA
PIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCYRRHGHNEADEPNATQPLMYQKI
KKHPTPRKLYADVLIDKNESDIETATQLVNEYRDALDRGEVVVKEWRPMALHSVDWSPYL
GHEWDMQWESTYDKQRLVELGNRLCQYPESHKLQSRVNKLYNDRLAMMTGEKAIDWGMAE
TLAYATLVDDGKRIRISGQDSGRGTFFHRHSVLHNQSDASTYIPLANIHDKQGPFQVFDS
VLSEEAVLAFEYGYATAEPGGLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRLCGLTML
LPHGYEGQGPEHSSARLERYLQLCAEQNMQVVVPSTPAQVYHMIRRQVVRPMRRPLIVMS
PKSLLRHPLCTSTLEDLAEGAFQAAIPEVDNLEPSKVKRVVFCSGKVYFDLLEQRRNNEQ
EDVAIVRIEQLYPFPMEEVQAAIAQYTNVEDFVWCQEEPQNQGAWYCSQHNFRAAIPAGA
DLKYAGRPASASPAVGYMSVHLKQQKALVEDALNVNSKTSD

NT seq 2826 nt +upstreamnt +downstreamnt
atgcacaacggcgtgatgaaggcatggctcgagtcttcacacttggctggcgccaatgca
acgtatgtagaggacctctacgaactgtatctaagtgatcccgatctggtaagtgaggag
tggaaacgtgtttttgagggcttgcctaagccatcagaagaagtggcagaacagccgcat
tcacgtgtccgtgactacttccgacgactcgctagagaaacaaagcattacaatgtccaa
gttagtgatccagatgtcgatgcaaaacaagtaaaagttctacagcttatcaacgcatac
cgcttccgcggacacgaggctgcagaattggatccactaggtctgtggcaacgtccacct
gtggcggagctagacccagcatttcataatcttaccgaagacgacttcgaagaaactttc
aacgtaggttcttttgctgttgggcaagaaaccatgaagttgaaagacatctacgcagcc
ctcaagaaaacttactgcggttccatcggtgctgaatacatgcacatgactgacacagag
caaaagcgttggatccaacaacgtcttgagtctgtcgtaggccagccatcattcaaccaa
gatgaaaaacgcacgttccttgaagagttgactgcagcggaaggccttgagcgttattta
ggcgcaaaattccctggtgcgaagcgattctctctagaaggtggtgatgcgcttatccca
atgacgaaagaactgattcgtcatgcgggtaagagtggcatgcgtgaagtggttattggt
atggctcaccgtggtcgtttgaacatgctggtgaacgtactgggtaagaaaccacaagat
ctattcgatgagttcgcgggtaagcacgatgaaacgtggggtaccggtgacgttaaatac
caccaaggtttctctgcagacttcgcaactcctggtggcgatgttcacttagcgcttgcg
tttaacccatctcacttagaaatcgtaaacccagtggttatcggttcagtgcgtgcacgt
caagaccgtttgggtgacaaccacggcagcaaagttcttcctatcactattcatggtgac
tctgcgattgctggccaaggtgtagtggctgaaacgttcaacatgtcacttgctcgtggt
ttctgtgttggcggtacggttcgtattgttgtaaacaaccaggttggctttacaacgtct
aacccgcgtgacactcgatcaaccatgtattgtactgacatcgctaagatggttcaggcg
ccgattttccacgttaacgccgatgatccagaagcggttgcttttgttactcgcattgca
ttggattaccgcaacgagttcaagcgtgacgtcgtgattgatttggtttgttaccgccgt
catggtcacaacgaagcggatgaaccgaacgcaactcagccgttgatgtaccaaaaaatc
aaaaagcacccaactcctcgtaaactgtacgccgatgttctgattgataagaatgagtcg
gatattgaaactgcaacgcagttggtgaacgagtatcgtgatgcacttgaccgcggtgaa
gtcgtggtgaaagagtggcgtccgatggcattgcattctgtagactggtctccttactta
ggacacgagtgggatatgcaatgggaatcgacctacgataagcaacgccttgtcgagcta
ggtaatcgtttatgtcagtacccggaaagccacaagctgcaaagccgagtaaacaagctg
tacaacgatcgcttagcaatgatgacaggtgagaaggctattgactggggtatggctgaa
acattggcttacgcgacattggtagacgatggtaagcgtatccgtatttctggtcaggac
tcaggtcgtggtactttcttccatcgtcactcagttcttcacaaccaatcagatgcaagc
acttacatcccgctagcgaatatccatgacaagcaggggcctttccaagtttttgactct
gtgttgtcggaagaagctgttcttgcatttgagtacggttatgcaacagctgaacctggc
ggtttgaccatttgggaagcgcagtttggtgacttcgctaacggcgcacaagtggttatt
gaccaattcatttcgtctggtgagcaaaagtggggacgtttgtgcggcctgacgatgctt
ctgcctcatggttacgaaggccaaggtccggagcactcatctgctcgtctagagcgttac
cttcaattgtgtgctgagcaaaacatgcaggtcgttgtaccatcaacgccagctcaggtg
taccacatgattcgtcgtcaagtagtacgcccaatgcgtcgaccattgattgtaatgtct
cctaaatcattgcttcgtcatcctctttgtacttcgactctagaagaccttgcagaaggt
gcgttccaagcagcgatccctgaagtggataacttggagccaagcaaagtgaaacgcgtc
gtgttctgttcgggtaaggtgtatttcgaccttcttgagcagcgtcgcaacaacgagcaa
gaagacgtagcaatcgtgcgtattgagcagctttacccattcccgatggaagaagtacaa
gcggctattgctcaatacactaacgttgaagacttcgtgtggtgtcaggaagagcctcag
aaccaaggtgcttggtactgtagtcaacataacttccgtgccgctattcctgcaggtgca
gatcttaaatacgcaggtcgcccagcttctgcttcgccagcagttggctacatgtcggtg
cacttgaaacaacaaaaagcgttggttgaagacgctctgaacgtgaactcaaaaacttcg
gactaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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