KEGG   Vibrio parahaemolyticus RIMD 2210633: VP0918
Entry
VP0918            CDS       T00120                                 
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpX
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:vpa03110]
    VP0918
Chaperones and folding catalysts [BR:vpa03110]
 Heat shock proteins
  HSP100
   VP0918
SSDB
Motif
Pfam: AAA_2 zf-C4_ClpX AAA ClpB_D2-small AAA_5 Mg_chelatase AAA_22 MCM RuvB_N AAA_16 AAA_7 Sigma54_activ_2 Sigma54_activat AAA_14 AAA_24 IstB_IS21 AAA_28 T2SSE TIP49 ABC_tran AAA_33 NACHT nSTAND3 DEAD AAA_18 AAA_21 B12-binding_2 AAA_23 ResIII TsaE AAA_29 AAA_25
Other DBs
NCBI-ProteinID: BAC59181
UniProt: Q87R79
Position
1:953916..955196
AA seq 426 aa
MTDKSKESGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKK
ESEALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLI
GPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAER
GIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKNETKTVGELFTQVEPEDLVKY
GLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAALFELENAELEFREDALRAI
AKKAMERKTGARGLRSILESVLLETMYELPSATDVSKVVIDESVINGESEPLLIYSNADN
QAAGAE
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgacagataaaagcaaagaaagtggcagcggtaaattgctgtactgttctttctgcggc
aaaagtcagcacgaagttcgcaagctaatcgcaggtccgtcagtttacatttgcgacgag
tgtgtcgacctatgtaacgatattattcgcgaagaaatcaaggatgttctccctaagaaa
gaatctgaagcgttaccaacgccaaaacagatccgtgaacaccttgacgactatgtgatc
ggacaagattacgcgaaaaaagtgctcgcagttgcggtatataaccactacaagcgttta
cgcaatggtgatacaacgagcgaaggtgtggagcttggtaaaagtaacatccttctaatt
ggtcctacaggtagtggtaaaacgctgcttgctgagactctagctcgattcttggatgtg
ccattcacaatggcagacgcaaccacactaaccgaagctggttatgtgggtgaagacgtt
gaaaacatcatccaaaagcttctgcaaaaatgtgattacgatgtagcgaaggctgaacgc
ggcattgtttacattgacgaaattgacaaaatttctcgcaaagctgaaaacccatcaatt
acgcgtgacgtatctggtgaaggtgttcagcaagcgctattgaaacttatcgaaggtacg
gttgcttcagttccacctcaaggtggtcgtaagcatccacagcaagaattcctacaagtg
gacacgtctaagattctgttcatctgtggtggtgcatttgctggtttagataaagttatc
gaacagcgtgtagctacgggtactggtatcggctttggtgcagaagtgcgctcgaagaac
gaaaccaaaaccgtcggcgaactgtttactcaggttgagccagaagatctagtgaagtat
ggtttgattccagaattcattggtcgtcttcctgtgacaacaacactgacagagcttgat
gaagaagcgttgattcagatcctatgtgaaccgaaaaacgcactgaccaagcagtatgca
gcattgtttgagctagaaaacgcagagcttgaattccgtgaagatgcccttcgtgcgatc
gcgaagaaagcaatggaacgtaagacaggtgctcgtggtttgcgttcaattctggaaagt
gttctgcttgaaaccatgtacgaactgccatctgcgacagatgtaagtaaagtcgtgatt
gatgaatccgtcatcaatggtgagtcagaaccactgcttatttacagcaatgccgacaat
caggcagctggggcagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (32)   
   Pfam (32)   
All databases (40)   

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