KEGG   Vibrio parahaemolyticus RIMD 2210633: VP1392
Entry
VP1392            CDS       T00120                                 
Name
(GenBank) putative ClpA/B-type protease
  KO
K11907  type VI secretion system protein VasG
Organism
vpa  Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VP1392
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpa02044]
    VP1392
Secretion system [BR:vpa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VP1392
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_16 ClpB_D2-small AAA_5 AAA_22 nSTAND3 Sigma54_activat AAA_7 AAA_25 TniB AAA_18 NACHT bpMoxR Zeta_toxin RuvB_N AAA_23 AAA_33 Clp_N ResIII DUF4715 NEXCaM_BD
Other DBs
NCBI-ProteinID: BAC59655
UniProt: Q87PV8
Position
1:complement(1492844..1495516)
AA seq 890 aa
MININLSSLIQRLHPIAKVALEDAAALAVSEKANEVQIEHYLLSLLERPNSDFDVLLSHF
DCSENLLRQSVRSTLDTNAKGNGSKPVFSALLIEWLQESWLVSSLDLSETQIRSGALLLT
LVSNPLRYGQHGYASILEAVNPDSLKRNFAELTSHSIEAQVATSEKTQAREDGSALSKFT
TDFTGKARKGEIDPVFCRDQEIRQIVDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQ
GDVPDNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVG
GGNQAGGSDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQ
AALIIRGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACARVNISL
NAIPASVETLQQELAAQQRELEALERDALQQTGDKHSLANIPDLKLAMETTKEELAEQEV
QWHKEKEQIQEMIALRSRLHELVFGKVNEEELVVDEDSEQDVSPYTEMDEEAVRIAISAC
QEQLDAIRNGNPLVHFEVGPDEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIKGQ
EYAIDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARAIADQMFGGERFMTTIN
MSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQV
FDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKEIDANIIAEAIRPTLNQHFK
PALLARMSVLPFVPLSDEAMTEIIHHKLNKVSQRLHSHHKLSLSYEESLVEFVLGNCRLA
ETGARNIDAVINRQLLPQLSTQLLVHDKDDSHTQITVSVDEQGTLTYAFS
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgataaatataaacctttcttcattaattcagcgtctacacccgatagctaaagtagca
ttagaagatgccgcagcactcgcagtctcggaaaaagcaaacgaagttcaaattgagcat
tatttactgagtctattagaaaggccaaatagtgattttgacgtcttattaagtcatttt
gattgttctgagaacttattgagacaatcggttcgatccacactcgataccaacgccaaa
ggaaatggcagcaaacctgttttttctgctttattaatcgaatggttacaagaaagctgg
ctggtttcttctttagatctatccgaaacacaaatccgctctggcgccctactccttact
cttgttagcaaccctctgcgttatggccaacatggttacgcctctattcttgaagcagta
aaccctgatagccttaaacgtaactttgcagaactaacaagccactctattgaggcgcaa
gtcgcgacttcagagaaaacacaagctcgtgaagatggttcagcactgagcaagttcacg
acagacttcactggtaaagcacgcaaaggcgaaatcgatcctgttttctgccgtgaccaa
gaaatccgccaaattgtagacattcttgctcgtcgccgtaaaaacaaccctattgccgtt
ggtgagccgggcgttggtaaaaccgcagtagtagaaggcttggcacttaagattgtacaa
ggtgacgtaccagacaaccttaaaggtgttgagctttacggcttggacatgggtcttctg
caagctggcgcaagcgtaaaaggcgaattcgaaaaacgcctaaatgcagtattggatgaa
gtgaaaaactcgccaacaccgatcatcttgttcatcgatgaagcgcacacccttgttggc
ggcggcaaccaagcgggcggtagcgatgctgctaacttattaaaacctgccctagcacgt
ggtgaagtaaagacaatcgcagcaacaacatggtcggaatacaaaaagtactttgagaaa
gatccagctcttgcgcgtcgtttccaactggtgaaactcgacgaaccgtctcctgagcaa
gcagcattgatcattcgtggtctgcgcccggcgtacgagaaatctcacaatgtttacgta
cgtgacgacgctatcaccgcagcggcagcgctttctgctcgatacatctctggtcgccaa
ctgccagacaaagcgatcgatgtactagatacggcatgtgcacgagtgaacatcagcctt
aatgccattcctgcttctgttgagactcttcagcaagaacttgcagctcaacagcgcgag
cttgaagcgcttgagcgtgatgctctgcagcaaactggcgacaagcacagccttgctaac
attccagacctaaaattggcaatggaaacgacaaaagaagagctagcagaacaagaagtg
caatggcacaaagaaaaagagcagatccaagagatgattgctctacgctctcgcttacat
gaactggtctttggcaaagtaaatgaagaagagcttgttgtagacgaagattcagaacaa
gacgtttctccatatacagaaatggatgaagaagcggtccgcattgcgatttcagcatgc
caagaacagttagacgcaatccgcaatggcaacccattagttcactttgaagttgggcca
gatgaagtcagccacgttatctcagactggactggcattccaatgggtaagatgcttcaa
gacgaagcagaaaccacgctaaaactgaaagaaagcctaacacaaagcatcaaaggccaa
gaatacgctatcgatgcactgtctgaaggcattcaaaccgcaaaagctggcttgggtaat
ccagacgcaccgacaggcgtattcctgctagttggcccaagtggcgtgggtaaaaccgaa
actgctcgtgcgatcgctgatcaaatgtttggtggtgagcgctttatgacgaccattaac
atgtctgagttccaagagaagcacacggtatctcgcctaatcggttcgcctcctggttac
gtaggttacggtgaaggcggcatgctgacagaagcggtacgtcagcgtccatattctgtt
gtacttcttgatgaagtagaaaaagccgatccagaagtgttgaacctgttctaccaagtg
ttcgacaaaggtacgctgaacgacggcgaaggccgcaccatcgacttcaagaacacgctg
atcatcatgaccagcaaccttgcgacgcacgaaattgaatctctggttcaccagtctaaa
gaaattgatgctaacatcatcgcagaagccatccgccctactttgaaccaacacttcaag
ccggcgctgttggcacgtatgtccgtacttccgtttgtgcctctgtctgacgaagcaatg
acagaaattatccaccacaaactaaacaaagtttctcagcgcctacatagccatcacaag
ttgtccctgagctacgaagaaagcttggtcgagttcgtactaggtaactgtcgccttgct
gaaacaggcgcacgtaacattgacgcggtcatcaaccgtcagttactacctcagctatcg
acacagctattggtgcatgataaggatgattcacacacgcaaatcacagtttctgtcgat
gagcaaggaacactgacctatgcgttcagctaa

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