KEGG T00120: VP2486

Vibrio parahaemolyticus RIMD 2210633: VP2486

Entry

VP2486 CDS T00120

Definition

beta-N-hexosaminidase

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

vpa Vibrio parahaemolyticus RIMD 2210633

Pathway

vpa00511	Other glycan degradation
vpa00520	Amino sugar and nucleotide sugar metabolism
vpa01100	Metabolic pathways
vpa01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:vpa00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:vpa00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glyco_hydro_20b Glycohydro_20b2

Other DBs

NCBI-GI:

28899260

NCBI-GeneID:

1190001

UniProt:

Q87LX2

Position

I:2618150..2620069

AA seq 639 aa
MEYRVDLVVLSEQKQNCRFGLTFHNLSDQDLHNWSLIFAFDRYILPDSISNGQLKQIGSY
CTLKPEGLVLAANHHFYCEFSIGSNPFRYYSDGFNEALVNFEVNGNLQRAQVDVTPIVLA
SPYRERSEIPSSLTHAQPLLPKPNHIEVSDHCFSFNHHAGVAVYSNLANSAKEWLLEELK
RIHQFEFASDNGSQIIFKGNPTLDEGAYKLKVAEESIKIEAGSSSGFTHACATLLQLIKV
GDQPASMEVVCCSIKDRPRFRYRGMMLDCARHFHSVEQVKRLINQLAHYKFNTFHWHLTD
DEGWRIEIKSLPQLTDIGAWRGLDETNEPQYTHLAERYGGFYTQEDIKDVVAFASKRGIT
VIPEIDVPGHCRAAIKSLPHLLVEAEDTTEYRSIQHYNDNVINPALPGSYEFIDKVLEEV
SALFPAPYVHIGADEVPNGVWSKSPACQALMEQLGYSDYKELQGHFLRHAEDKLRKLGKR
MLGWEEAQHGDKVSKDTVIYSWLSEEAALNCARQGFDVVLQPAQTTYLDMTQDYAPEEPG
VDWANPLPLEKTYNYEPLAEVPADDPIRKRIWGIQTALWCEIINNQSRMDYMVFPRLTAM
AEACWTDKQHRDWTDYLSRLKGHLPLLDLQGVNYRKPWK

NT seq 1920 nt +upstreamnt +downstreamnt
atggaatatcgtgttgatctcgtcgtcctatcagaacaaaagcaaaactgccgtttcgga
ctgactttccataatttgagcgatcaagatctccacaattggagcctgatttttgctttt
gatcgctacattctgccggatagtatttcgaatggtcagctcaagcaaattggcagctac
tgcaccctcaaaccagaagggttggtgctggcagctaaccatcatttttactgcgagttc
agtattggttcgaacccattccgttactattctgatggattcaatgaagccttggtcaac
tttgaagtcaacggcaaccttcagcgagctcaagtcgatgtcacgccgatcgtattggct
tcaccgtaccgtgaacgtagtgagatcccttccagcttgacgcatgcgcagcctttgttg
ccaaaaccaaaccatatagaagtcagcgatcactgctttagctttaatcatcacgccggc
gttgcggtttattcaaacctagccaattcagctaaagagtggttacttgaagagcttaag
cgcattcatcaatttgagttcgcatcagacaatggcagtcagatcatcttcaaaggcaac
ccaaccttggatgaaggcgcttacaagctgaaggtagcagaagagtcgatcaaaattgaa
gcaggctcttcgtctggttttacccatgcttgtgcaacgttattgcaactgatcaaagtt
ggcgatcaaccagcctcaatggaagtggtttgctgttcaatcaaagaccgaccacgtttt
cgttaccgcggtatgatgctagattgtgctcgccattttcactccgttgagcaagtcaaa
cgtttgatcaaccagttggctcactacaagttcaatacattccattggcaccttaccgat
gatgaaggttggcgaattgagatcaaatcattgcctcaactaaccgatattggcgcatgg
cgtgggttggatgaaaccaatgagccacagtacacgcaccttgctgagcgttacggcggt
ttttacactcaagaagacatcaaagacgtggttgcatttgcttctaaacgaggcatcact
gttatccctgaaatcgatgtaccaggccactgccgagctgccatcaagtcgttaccacac
ctattggtagaagcagaagataccactgaataccgcagcattcagcattacaacgacaat
gtcattaacccagctctgccggggagctatgagtttatcgataaagtgttggaagaagtc
tccgcgttgttccctgccccttatgtccatatcggtgcggatgaagtacctaacggcgta
tggtcaaaaagcccagcgtgccaagcactaatggaacaactgggttacagcgactacaaa
gagttacaagggcacttcttgcgtcatgccgaagacaaactgcgcaaacttggcaagcgc
atgctgggttgggaagaagcacagcatggcgacaaagtcagcaaagacacagtgatctat
tcgtggctaagcgaagaagcggcgttgaactgcgcgcgccaaggtttcgatgtggtgcta
caaccagcgcaaaccacctacttagatatgacccaagattacgcaccagaagaaccgggc
gtggattgggctaacccgttgccgctagaaaaaacttacaactatgaaccactcgctgaa
gtgccagccgacgatccaatacgtaaacgcatttggggcattcaaaccgcattgtggtgt
gaaatcatcaacaaccagtctcgtatggactacatggtcttcccgcgcttaaccgcaatg
gcagaagcatgttggacagacaaacaacaccgagactggaccgactatttatcacgtttg
aaaggacacctaccgctgcttgatttgcagggagtgaattaccgtaaaccgtggaagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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