KEGG   Vibrio parahaemolyticus BB22OP: VPBB_1583
Entry
VPBB_1583         CDS       T02409                                 
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb03030  DNA replication
vpb03430  Mismatch repair
vpb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VPBB_1583
   03430 Mismatch repair
    VPBB_1583
   03440 Homologous recombination
    VPBB_1583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpb03032]
    VPBB_1583
   03400 DNA repair and recombination proteins [BR:vpb03400]
    VPBB_1583
Enzymes [BR:vpb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VPBB_1583
DNA replication proteins [BR:vpb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VPBB_1583
DNA repair and recombination proteins [BR:vpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VPBB_1583
SSDB
Motif
Pfam: RNase_T RNase_H_2 DDE_Tnp_2
Other DBs
NCBI-ProteinID: AGB10061
Position
1:complement(1785988..1786734)
AA seq 248 aa
MMWLEKSKASTPLLDTSQTPEWSVLFEQLAEQAQDQRLKRYYSTPMVNGDTPLKEVPFVS
VDFETTGLNAEDDAILTIGLVPFTIDRVQCSGSAHWIVNPNRELNEESVVIHGITDSEVK
NAPQLTQILGEILDALAGKVVLVHYKNIERQFFYNALLNTIGEGIQFPVVDTLDIEYALQ
RRECSGIWNKLKGKKPGSVRLGHARERYGLPAYQPHHALTDALATAELFQAQLQYHFNRD
MPISAIWQ
NT seq 747 nt   +upstreamnt  +downstreamnt
atgatgtggttggaaaaaagtaaggcgagtacaccgctgctcgatacttcgcaaacgccg
gagtggtcagtattgtttgagcagttggcagagcaagcgcaagatcaacggttgaagcga
tactattcgactcctatggtgaatggggatacgccattaaaagaggtgccgtttgtctcg
gtagattttgaaacgacgggcttaaatgcagaagacgatgccattcttaccattggtctt
gtgccgtttacgattgaccgagtgcagtgcagtggttcagcgcattggattgtaaatccg
aaccgagagcttaatgaggagtctgttgttattcatggcattacggattctgaagtgaaa
aacgcaccccagttaacacaaatactaggtgagattttggatgcgctcgctggcaaggtg
gtgctagtgcactacaagaatatcgagcgacagtttttttataatgcgcttttaaacacc
attggcgaagggattcaatttcccgtcgttgatacattggatattgagtacgcgcttcaa
cgccgagaatgctcaggcatctggaacaagttaaaaggtaagaagccagggtcagtgagg
ttggggcatgctcgggaacgatatggtctgccagcttatcaaccgcaccacgctttaacg
gatgcattggcgacggcagagttgtttcaagctcagttgcaatatcactttaaccgagac
atgccaatttctgctatttggcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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