KEGG   Variovorax paradoxus B4: VAPA_1c21910
Entry
VAPA_1c21910      CDS       T02835                                 
Name
(GenBank) transcriptional regulator, LacI family
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpd03000]
    VAPA_1c21910
Transcription factors [BR:vpd03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    VAPA_1c21910
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 Peripla_BP_4 LacI HTH_3 DIT1_PvcA
Other DBs
NCBI-ProteinID: AGU49295
UniProt: T1XAU3
Position
1:complement(2329112..2330122)
AA seq 336 aa
MAVTLRDVARAADVSIATASRALAGSSLTNHATQRHVIQVAAALGYRTNTFARALKTKRS
RLIGLTVHNLENASFQVLASVVQTRMQALGYQVILSISADDPEQERDIFKTLVDHSVDGL
IAVPNGANGAQLLAMEHADIPVICAVRRVEGATLESVLAGDLDGAYAGTKHLLDLGHRRI
GLIVGMSDTTSGKERLAGYKRAMQEAGLPIDPALIQAGRYAPETGVTAANALLSMPTPPS
ALFVANHESSLGVLRVVSERGLLIPDDLSLLFYEDSPWFEWQRPAISVVDSGAAEMANLA
VDRLVQRLGGVANSGREYRVGSRLIQRASCRAIAPT
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcggtgacgctgcgcgacgtggcccgtgccgccgacgtttccattgccacggcctcg
cgtgcgctcgctggctccagcctgaccaatcacgccacgcagcggcacgtgatccaggtg
gccgccgccctcggctaccgcaccaacaccttcgcccgggcgctgaagaccaagcgctcg
cggctcatcggcctcaccgtgcacaacctggagaacgcctcgttccaggtgctcgcctcg
gtggtgcagacgcgcatgcaggcgctcggctaccaggtcatcctgagcatcagcgccgac
gaccccgagcaggagcgcgacatcttcaagaccctcgtcgaccacagcgtcgacggcctg
atcgccgtgcccaacggcgccaacggcgcccagctgctggccatggagcacgccgacatc
ccggtgatctgcgcggtgcgccgcgtcgagggcgccacgctcgaatcggtgctcgcgggc
gacctcgacggcgcctatgccggcacgaagcacctgctggacctcggacaccggcgcatc
ggcctgatcgtgggcatgagcgacaccacctccggcaaggagcgcctcgcgggctacaag
cgggccatgcaggaagcgggcctgcccatcgatccggcgctgatccaggccggccgctat
gcgcccgagaccggcgtgacggccgccaacgcgctgctgtcgatgcccacgccgccttcg
gccctcttcgtggccaaccacgagtcctcgctcggcgtgctgcgcgtggtgtcggagcgc
gggctgctgattcccgacgacctgtcgctgctgttctacgaagactcgccgtggttcgag
tggcagcgccccgccatcagcgtggtggacagcggtgccgccgaaatggccaacctcgcg
gtcgaccggctggtgcagcgcctgggcggcgtggccaacagcggccgcgaataccgggtc
ggctcgcgcctgatccagcgcgcctcctgccgtgccatcgcgccgacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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