KEGG   Variovorax paradoxus B4: VAPA_1c28100
Entry
VAPA_1c28100      CDS       T02835                                 
Symbol
infB
Name
(GenBank) translation initiation factor IF-2
  KO
K02519  translation initiation factor IF-2
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:vpd03012]
    VAPA_1c28100 (infB)
   03029 Mitochondrial biogenesis [BR:vpd03029]
    VAPA_1c28100 (infB)
Translation factors [BR:vpd03012]
 Eukaryotic type
  Initiation factors
   MTIFs
    VAPA_1c28100 (infB)
 Prokaryotic type
   VAPA_1c28100 (infB)
Mitochondrial biogenesis [BR:vpd03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    VAPA_1c28100 (infB)
SSDB
Motif
Pfam: IF-2 GTP_EFTU IF2_N IF2_assoc GTP_EFTU_D2 MMR_HSR1 Ras FeoB_N Arf Roc MMR_HSR1_Xtn RsgA_GTPase DDRGK
Other DBs
NCBI-ProteinID: AGU49907
UniProt: T1XAE9
Position
1:complement(2969902..2972856)
AA seq 984 aa
MSSTTVAEFANELKKTPETLLDQLKSAGVPKAAPTDALTEADKQRLLGFLKASHGTAEPE
RKKITLTKKSTSEIKQADATGRARTIQVEVRKKRTFIQRDDGHPATPEAQQVAEAPAAAP
AAPRIDEAELARREEEARRQAELIRRQEEELVEKRRLREEAEAREREQAEKAERAEQAEQ
EAARIAAEKKAADAATAAPAKEAAKPVAAPVAAATAAAEQEAADTKLAAQTAATQAKEDA
KAKAAAESKARADEEAARAKDLDERRRKALAEAEAIRAMMNAPARVLVPHKAPEKPQPEK
AAVKGTLHKPAAPAARPGAPAAPGAAAAPGAAGAGKEVKSAKLSSSWAGDPAKKKEIKTR
GDASGGVGRGNWRGGPRGRRGSNDRGGHEEHVQAAPVEARILEVHVPETITVAELAHKMA
VKAQEVIKQLMKLGQMATINQSLDQDTAMILVEEMGHNAVVAALDDPEAFTDEDVSAQTA
EALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTERGMVSFLDT
PGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKIDKPDA
SPDRVKQELVTEEVVPEEYGGDVPFVPVSAKTGQGIDELLEQVLLQAEVLELKAPVDAAA
KGLVIEAQLDKGRGPVATVLVQSGTLKTGDVVLAGSTYGRVRAMLDEDGKTIKSAGPSIP
VEIQGLTEVPQAGDEFMVMSDERRAREIATYRAGKFRNTKLAKAQAANLQNMFTDLSAGE
VQTLRIIIKADVQGSQEALAQSLLKLATEEVKVQIVYAGVGGISESDINLAIASKAIVIG
FNVRADAGARKLAEGNGVQLNYYSIIYDAVDEIKVAMSGMLAPERREEIIGSAEIRTVFV
ASKIGTVAGSYITSGSVNRTAHFRLLRDNVVIYTGEVDSIKRMKDDVREVREGFECGIKL
KNYNDIKEGDQLEFFEIKEIARTL
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgtccagtaccactgtcgccgagttcgcgaacgagctcaagaagactcccgaaaccttg
cttgaccagctcaagagtgcaggtgtgcccaaggcggcacccaccgatgcactcaccgag
gctgacaagcagcgcctgctcggctttctcaaagccagccatggcaccgccgagcccgag
cgcaagaaaatcacgctgacgaaaaagtcgaccagcgagatcaagcaggccgacgccacc
ggccgcgcccgcaccatccaggtcgaggtgcgcaagaagcgcaccttcatccagcgcgac
gacggccacccggccacgcccgaagcgcaacaggtggccgaagcgcccgccgcggcaccc
gctgcgccccgtatcgacgaagccgaactggcccgccgcgaggaagaggcgcgccgccag
gccgagctgatccgccgccaggaagaagaactggtcgagaagcgccgcctgcgcgaagaa
gccgaagcccgcgaacgcgagcaggccgaaaaggccgagcgcgctgagcaggcggagcag
gaagccgcgcgcatcgccgccgagaagaaggccgctgacgcagccaccgccgcgcctgcc
aaggaagcggccaagccggtcgccgcgcctgttgcagccgccacagccgccgccgaacag
gaggccgccgacaccaagctggctgcgcaaacggcagccacgcaagccaaggaagacgcg
aaggccaaggccgccgccgaatcgaaggcccgtgccgacgaggaagccgcccgcgccaag
gacctcgacgagcgtcgccgcaaggcactcgccgaagccgaagccattcgcgccatgatg
aacgcaccggctcgcgtgctggtgccgcacaaggcgcccgagaagccgcagcccgaaaag
gccgcggtcaagggcacgctgcacaagccggccgcgcccgcagcgcgtcccggcgcgccg
gccgcaccgggcgctgccgcagcccctggcgccgctggtgccggcaaggaagtcaagtcg
gccaagctctcgtcgagctgggcgggcgatcctgccaagaagaaggaaatcaagacccgc
ggcgatgccagcgggggtgtcggccgcggcaactggcgcggaggcccgcgcggccgccgc
ggcagcaatgaccgcggaggccacgaagagcatgtgcaggccgcaccggtggaggcgcgc
attctcgaagtgcacgtgcccgagaccatcacggtggccgagctcgcgcacaagatggcc
gtcaaggcgcaggaagtcatcaagcagctcatgaagctgggccagatggcgaccatcaac
cagtcgctggaccaggacaccgccatgatcctggtggaggaaatgggccacaacgcggtc
gttgccgcgctggacgaccccgaggccttcaccgacgaggacgtgtcggcgcaaaccgcc
gaagccctgccgcgcgcaccggtcgtgaccgtcatgggccacgtcgaccacggcaagacc
tcgctgctcgactacatccgccgcgccaaggtcgcagcgggcgaagccggcggcatcacg
cagcacatcggtgcctaccacgtgcaaaccgaacgcggcatggtgtcgttcctcgacacc
ccgggtcacgaggccttcacggccatgcgtgcccgtggtgcgcaggccaccgacatcgtc
atcctcgtggtggcggccgacgacggcgtcatgccccagaccaaggaagccatcaagcac
gcgaaagccgctggtgtgccgatcgtggttgccatcaacaagatcgacaagcccgatgcc
agcccggaccgcgtgaagcaggaactggtgaccgaggaggtcgtgcccgaagagtacggc
ggcgacgtgccgttcgtgccggtgtccgccaagacgggccagggcatcgacgagctgctc
gagcaggtgctgctgcaagctgaagtgctggagctcaaggcgccggtggatgccgctgcc
aagggcctggtcatcgaagcgcagctcgacaagggccgcggcccggtcgcgaccgtgctg
gttcagtccggcacgctcaagaccggcgacgtggtgctggcaggttcgacctatggccgc
gtgcgcgccatgctcgacgaagacggcaagaccatcaagtcggccggcccctcgattccg
gtcgagatccaaggcttgaccgaagtgccgcaggcgggcgacgagttcatggtgatgagc
gacgagcgccgtgcgcgcgaaatcgccacctaccgtgccggcaagttccgcaacaccaag
ctggcgaaggcccaggccgcgaacctgcagaacatgttcaccgacctctcggccggcgaa
gtgcagacgctgcgcatcatcatcaaggccgacgtgcagggctcgcaggaagcgctggcc
cagtcgctgctcaagctggcgaccgaagaggtcaaggtgcagatcgtgtacgccggcgtg
ggcggcatcagcgaaagcgacatcaacctcgcgatcgcttcgaaggcgatcgtgatcggc
ttcaacgtgcgtgccgatgccggtgcgcgcaagctggccgaaggcaatggcgtgcagctg
aactactacagcatcatttacgacgccgtggacgagatcaaggtcgcgatgtcgggcatg
ctggcaccggagcgccgcgaggaaatcatcggctcggccgagatccgcacggtgttcgtg
gcctcgaagatcggtacggtcgcaggttcgtacatcacctcgggctcggtcaaccgcacg
gcgcatttccgcctgctgcgcgacaacgtggtgatctacaccggcgaagtcgactcgatc
aagcgcatgaaggacgacgtccgcgaagtgcgcgaaggcttcgagtgcggtatcaagctc
aagaactacaacgacatcaaagagggcgatcagctcgagttctttgaaatcaaggagatc
gcccgtacgctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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