KEGG   Variovorax paradoxus B4: VAPA_1c28200
Entry
VAPA_1c28200      CDS       T02835                                 
Name
(GenBank) lysine decarboxylase
  KO
K01584  arginine decarboxylase [EC:4.1.1.19]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd00330  Arginine and proline metabolism
vpd01100  Metabolic pathways
vpd01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    VAPA_1c28200
Enzymes [BR:vpd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.19  arginine decarboxylase
     VAPA_1c28200
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N DegT_DnrJ_EryC1 Beta_elim_lyase Colicin-DNase WHH
Other DBs
NCBI-ProteinID: AGU49917
UniProt: T1XAF9
Position
1:complement(2983667..2985967)
AA seq 766 aa
MKFRFPIVIIDEDFRSENTSGLGIRALAQAFESEGFEVLGVTSYGDLSQFAQQQSRASAF
ILSIDDEEFTVGPDLDPAVLSLRSFIGEVRRKNADVPIYIYGETKTSRHIPNDILRELHG
FIHMFEDTPEFVARHIIREAKSYLEGVQPPFFKALIDYAEDGSYSWHCPGHSGGVAFLKS
PVGQMFHQFFGENMLRADVCNAVEELGQLLDHTGPVAASERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPDDVVVVDRNCHKSILHAIIMTGAIPVFMKPTRNHFGIIGPIPKSEFE
QSAIKAKIKANPLLADVDPNKVKPRVMTLTQSTYDGVIYNTETIKNMLDGYVDTLHFDEA
WLPHAAFHPFYGAYHAMGKRRVRPKESLVFATQSTHKLLAGISQASHVLVQDSQNRALDR
DLFNEAYLMHSSTSPQYAIIASCDVAAAMMEPPGGTALVEESILEALDFRRAMRKVEDEF
GKDEWWFKVWGPEKLVDEGIGRAEDWIMTGEKNGKPKNKKSPRNWHGFGELADGFNMLDP
IKSTIVTPGLDLEGNFAETGIPASVVTKFLAEHGVIVEKTGLYSFFIMFTIGITKGRWNT
LLTALQQFKDDYARNQPMWRILPEFCQQHPGYERLGLRDLCQHIHQLYARFDVARLTTEM
YLSDLTPAMKPSDAFAHIAHRKTERVEIDELEGRITTSLITPYPPGIPLLIPGEVFNKKI
VDYLRFSREFNSQCPGFETDIHGLVARVDETGKKRYYADCVAAPKK
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgaaatttcgcttccccatcgtcatcatcgacgaggacttccgctccgaaaacacctcg
ggcctcggtattcgcgcgctcgcgcaggccttcgaaagcgagggcttcgaggtgctgggc
gtcacgagctacggggacctgagccagttcgcgcaacagcaaagccgcgccagcgccttc
atcctgtcgatcgacgacgaggaattcacggtcggccccgacctcgatcccgccgtgctg
agcctgcgcagctttatcggcgaggtgcgccgcaagaacgccgacgtgccgatctacatc
tacggcgaaaccaagacctcgcgccacatccccaacgacatcctgcgcgagctgcacggc
ttcatccacatgttcgaggacacgccggagttcgtggcgcgccacatcatccgtgaggcc
aagagctacctcgaaggcgtgcagccgccgttcttcaaggcgctgatcgactacgcggaa
gacggctcgtactcgtggcactgcccgggccattcgggcggcgtggcgttcctgaagagc
ccggtgggccagatgttccaccagttcttcggcgagaacatgctgcgcgccgacgtctgc
aacgcggtggaagaactcggccaactgctcgaccataccggcccggtggcggccagcgaa
cgcaatgcggcgcgcattttcaacgccgaccattgcttcttcgtgaccaacggcaccagc
accagcaacaagatggtctggcaccacacggtggcacccgacgacgtggtggtggtcgac
cgcaactgccacaagtcgatcctgcacgcgatcatcatgaccggcgcgattccggtgttc
atgaagcccacgcgcaaccacttcggcatcatcggcccgattccgaagagcgagttcgag
cagagcgccatcaaggccaagatcaaggccaatccgctgctcgccgacgtggaccccaac
aaggtcaagccgcgcgtgatgacgctcacccagtcgacctacgacggcgtgatctacaac
accgagaccatcaagaacatgctcgacggctacgtcgacacgctgcacttcgacgaggcc
tggctgccgcatgccgccttccacccgttctacggcgcctaccatgccatgggcaagcgc
cgtgttcggcccaaggagtcgctggtgtttgccacgcagtcgacccacaagctgctcgcg
ggcatcagccaggccagccacgtgctggtgcaggactcgcagaaccgtgcgctcgaccgc
gacctgttcaacgaggcctacctgatgcactcgtcgaccagcccgcagtacgcgatcatc
gcaagctgcgacgtggccgcggccatgatggagccgcccggcggcaccgcgctggtggag
gaaagcattctcgaggcgctcgacttccgccgcgcgatgcgcaaggtcgaggacgagttc
ggcaaggacgaatggtggttcaaggtctggggccccgagaagctcgtcgacgaaggcatc
ggccgcgccgaagactggatcatgacgggcgagaagaacggcaagccgaaaaacaagaag
tcgccgcgcaactggcacggcttcggcgagctggccgatggcttcaacatgctcgacccg
atcaagtcgaccatcgtgacgcccggcctcgacctcgaaggcaatttcgccgagaccggc
attcccgccagcgtggtcaccaagttcctggccgagcacggcgtgatcgtggagaagacc
gggctctacagcttcttcatcatgttcaccatcggcatcaccaagggccgctggaacacg
ctgctcacggcgctgcagcagttcaaggacgactacgcgcgcaaccagccgatgtggcgc
atcctgccggagttctgccagcagcatcccggctacgagcgcctgggcctgcgcgacctg
tgccagcacatccaccagctgtacgcccgcttcgacgtggcgcgcctgacgaccgagatg
tacctgagcgacctgacgccggccatgaagccgagcgatgccttcgcccacatcgcgcac
cgcaagaccgagcgcgtggagatcgacgagctcgaaggccgcatcaccaccagtctgatc
acgccgtacccgccgggcattccgctcttgattccgggcgaggtgttcaacaagaagatc
gtcgactacctccggttctcgcgcgagttcaactcgcagtgcccgggcttcgagaccgac
atccatggcctggtggcgcgcgtcgacgaaaccggcaagaagcggtactacgcggactgc
gtggccgcgccgaagaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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