KEGG   Variovorax paradoxus B4: VAPA_1c45100Help
Entry
VAPA_1c45100      CDS       T02835                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase MutM (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vpd  Variovorax paradoxus B4
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vpd00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VAPA_1c45100 (mutM)
Enzymes [BR:vpd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VAPA_1c45100 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VAPA_1c45100 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:complement(4760352..4761164)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVEVTRRGFAERIAGARIDAVRIGKPLRWALMVAPETLVGRRVLQVRRRGKYLLI
DLDRGLLLLHLGMSGSLRFDALLPPPGVHDHFDLVTELGTLRLNDPRRFGAVVYVEDEAA
PWAVKLLGGLGMEPLGDAFDLDAFHAGLRKRRTAVKQVLLAGDVVVGVGNIYASEALFQA
GIRPTLSAARISRPRAARLHAAVREILARAVEKGGSTLRDFSNVDGQNGYFQLEATVYGR
AGEPCRVCATPIRQLRQGQRSTYYCPNCQK
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagcttcccgaagtcgaagtgacgcggcgcggttttgccgaacgcattgccggt
gcacgcatcgatgcggttcgcatcggcaaaccgttgcggtgggcgctgatggtcgcgccc
gagacgctggtcggtcgccgggtgctgcaggtgcggcggcgcggaaagtacctgctgatc
gacctcgatcgcggcctgctgctgctgcacctgggcatgtcgggcagcctgcgcttcgat
gcgttgcttcccccgccgggcgttcacgatcatttcgatctcgtgaccgaactcggtacg
ctgcggctgaacgatccgcgccgcttcggcgccgtggtctacgtggaggacgaggccgcg
ccgtgggccgtcaagctgctcggcggcctggggatggagccgctgggcgatgccttcgat
ctggatgcgtttcacgccggccttcgcaagcgccggacggcggtgaagcaggtgctgctc
gcgggcgacgtggtggtgggggtgggaaacatctacgcgtcggaggcgctgttccaggcg
ggcatccgacccacgctttcggccgcgcgcatcagccggccgagggcggccaggcttcat
gcggccgtgcgcgaaatccttgcaagggcggtcgagaagggcggcagcacgctgcgcgac
ttttccaacgtggacgggcagaacggctatttccagctcgaagccacggtctacggccgg
gctggcgaaccctgtcgggtctgcgcaacgccgatccggcaactgcgccaagggcagcgt
tccacttactattgcccgaattgtcaaaaatag

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