KEGG T01392: Varpa

Variovorax paradoxus EPS: Varpa_0471

Entry

Varpa_0471 CDS T01392

Definition

malate synthase g (EC:2.3.3.9)

Orthology

K01638

malate synthase [EC:2.3.3.9]

Organism

vpe Variovorax paradoxus EPS

Pathway

vpe00620	Pyruvate metabolism
vpe00630	Glyoxylate and dicarboxylate metabolism
vpe01100	Metabolic pathways
vpe01120	Microbial metabolism in diverse environments

Module

vpe_M00012

Glyoxylate cycle

Class

Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:vpe00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:vpe00630]

SSDB

Motif

Pfam:

Malate_synthase DUF826

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(509385..511559)

AA seq 724 aa
MTARTTAHGLQVATELHRFIEEKVLPATGVASDVFWKGFDAIVSDLAPKNIALLAERDRL
QSELDAWHKKNPGPIADMPAYRAFLEKIGYLLPQPKGAKATTANVDSELALQAGPQLVVP
ILNARYALNAANARWGSLYDALYGTDAIPETGGAEKGKGYNPVRGAKVIEFARNVLDQAA
PLANGSHKMATGYSVKDGKLVVALQSSSTGLADPAQFIGYQGDAAAPSSVLLKHNGIHLD
IRIDRSTAIGKTDAAGVSDLVLEAALSTILDLEDSVAVVDAADKVVAYANWLGIVEGTLT
EEVAKGGKTFTRGLNADREYTGADGQPVKLHGRSLMFLRNVGHLMTNPAILYAGGKEIPE
GILDAVVTTTIATIDLKRKGNSRTGSIYIVKPKMHGPAEVAFASELFGRVEQLLGLPANT
VKLGIMDEERRTSVNLKACIAEAAARVAFINTGFLDRTGDEMHTAMQGGPMIRKGDMKSS
AWIGAYEKNNVLVGLSCGLRGKAQIGKGMWAMPDLMAAMLEQKIGHPKAGANTAWVPSPT
AATLHALHYHQVSVTAVQQELEKIDADAERDNILNALLQVPIAPEAKWTAEERQQEIDNN
VQGILGYVVRWIDQGVGCSKVPDIHNVGLMEDRATLRISSQHIANWLLHGVVTKAQVDET
FQRMAKVVDEQNAGDALYQPMAGNFATSAAYKAAQDLVFKGIEQPSGYTEPLLHAWRLKV
KGEA

NT seq 2175 nt +upstreamnt +downstreamnt
atgaccgcccgcaccaccgcccacggacttcaggtcgcgaccgagctccaccgtttcatc
gaagaaaaagtcctgcccgccaccggcgtggccagcgatgtcttctggaagggcttcgac
gccatcgtgagcgacctcgcgcccaagaacatcgcgctgctcgccgaacgcgaccgcctg
cagagcgaactcgacgcctggcacaagaagaaccccggcccgatcgccgacatgccggcc
taccgcgccttcctcgagaagatcggctacctgctgccgcagcccaagggcgcgaaggcg
acgaccgcgaacgtcgactccgaactcgcgctgcaggccggcccgcagctggtggtgccg
atcctgaatgcacgctatgcgctcaacgccgccaacgcgcgctggggctcgctgtacgac
gcgctctacggcaccgatgccatccccgaaaccggcggcgccgaaaagggcaagggctac
aacccggtgcgcggcgccaaggtcatcgagttcgcacgcaacgtgctcgatcaggccgcg
ccgctggccaatggctcgcacaagatggcgaccggctacagcgtgaaggacggcaagctg
gtcgtcgcgctgcagagcagcagcaccgggctcgccgaccccgctcaattcatcggctac
cagggcgatgccgcagcgccgtcgtcggtgctgctcaagcacaacggcattcacctcgat
atccgcatcgaccgcagcaccgccatcggcaagaccgatgcggccggcgtgagcgacctg
gtgctcgaagccgcgctctcgaccatcctcgacctcgaagactcggtggccgtggtggat
gcggccgacaaggtcgtcgcgtatgcgaactggctcggcatcgtcgaaggcacgctgacg
gaagaagtcgccaagggcggcaagaccttcacgcgcggcctgaacgccgaccgcgaatac
accggcgccgacggccaacccgtgaagctgcatggccgctcgctgatgttcctgcgcaat
gtcggtcacctgatgaccaacccggccatcctgtatgccggcggcaaggagattccggaa
ggcatcctcgatgccgtggtgaccaccaccatcgccaccatcgacttgaagcgcaagggc
aactcgcgcaccggcagcatctacatcgtgaagcccaagatgcacggcccggccgaagtg
gccttcgcgagcgagctgttcggccgcgtcgagcaactgctcggcctgcccgccaacacg
gtgaagctcggcatcatggacgaggagcgccgcaccagcgtgaacctgaaggcctgcatc
gccgaagcggccgcgcgcgtggccttcatcaacaccggcttcctggaccgcaccggcgac
gagatgcacaccgccatgcagggcggcccgatgatccgcaagggcgacatgaagtccagc
gcgtggatcggcgcctacgaaaagaacaacgtgctggtcggcctctcgtgcggcctgcgc
ggcaaggcgcagatcggcaagggcatgtgggccatgcccgacctcatggccgcgatgctc
gagcagaagatcggccaccccaaggccggcgccaacaccgcctgggtgccctcgcccacc
gccgccacgctgcacgcgctgcactaccaccaggtgagcgtgaccgcggtgcagcaggag
ctggaaaagatcgacgccgacgccgaacgcgacaacatcctcaacgcgctgctgcaggtg
ccgatcgcgcccgaagccaagtggacggccgaagagcgccagcaggaaatcgacaacaac
gtgcagggcatcctcggctacgtggtgcgctggatcgaccagggcgtgggctgctccaag
gtgcccgacatccacaacgtgggcctcatggaagaccgcgcgacgctgcgcatctctagc
cagcacatcgccaattggctgctgcacggcgtggtgaccaaggcgcaggtcgacgagacc
ttccagcgcatggccaaggtggtcgacgagcagaacgcaggcgacgcgctctaccagccg
atggccggcaacttcgcgacctcggccgcgtacaaggcggcacaggacctggtgttcaag
ggcatcgagcagccgagcggctacaccgagccgctgctgcatgcatggcgcctgaaggtc
aagggcgaggcctga

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-VPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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