KEGG   Variovorax paradoxus EPS: Varpa_1434
Entry
Varpa_1434        CDS       T01392                                 
Name
(GenBank) ABC transporter related protein
  KO
K10441  ribose transport system ATP-binding protein [EC:7.5.2.7]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Varpa_1434
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vpe02000]
    Varpa_1434
Enzymes [BR:vpe01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.7  ABC-type D-ribose transporter
     Varpa_1434
Transporters [BR:vpe02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   Ribose transporter
    Varpa_1434
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N TsaE AAA_29 AAA_30 RsgA_GTPase AAA_16 AAA_22 AAA_23 AFG1_ATPase AAA_25 AAA_15 nSTAND3 Imm7
Other DBs
NCBI-ProteinID: ADU35650
UniProt: E6V1J4
Position
1598805..1600316
AA seq 503 aa
MQPIVTIRDLCKSFAGVRALDKAQFDLRPGEVHALMGENGAGKSTLMKVLAGVYSKDSGE
VLIDGQPVDIASPRAAQALGIGIIHQELNLMNHLSAAQNIFIGREPRGRFGFFIDEEAMR
AETQRIFDRMNLRLDPHTPVGELTVAKQQMVEIAKALSFDSRVLIMDEPTAALNNEEVAD
LFRIIGQLKSQGVAIVYISHKMDELKRIADRVTVMRDGQYIATVSMADTPMDSLIAMMVG
RQLTEVENDFPDTSDNEIVLEARGITRGAMVRDASFVLRRGEILGFAGLMGAGRTELARA
VFGADPIDAGEVFVRGKRVSIRSPEDAVSHGIGYLSEDRKHFGLATGMDVETNIALPSMK
KFVSMGVFIDQAAIEAAGKRYVKQLNIKTPSVHQQVRLLSGGNQQKIVIAKWLLRDCSVL
FFDEPTRGIDVGAKAEIYRLLNELAAEGKAIVIISSELPEILRVSHRVLVMCEGRITGEL
TGREASQEKIMQLATRREAAATA
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgcaacccatcgtcaccattcgcgatctctgcaaatcctttgccggcgtgcgcgccctc
gacaaggcccagttcgacctgcggcccggcgaggtgcacgcgctcatgggcgagaacggc
gcaggcaaatccacgctcatgaaggtgctggccggcgtctacagcaaggactcgggcgag
gtgctgatcgacggccagcccgtggacatcgcgagcccgcgcgcagcgcaggcgctgggc
atcggaatcatccatcaggagctgaacctgatgaaccacctgagcgctgcgcagaacatc
ttcatcggccgcgagccgcgcgggcgcttcggcttcttcatcgacgaggaggcgatgcgc
gccgagacacagcgcatcttcgatcgcatgaacttgcggctcgacccgcacacgccggtc
ggcgaactcaccgtggccaagcagcagatggtcgagatcgcgaaggcgctctcgttcgat
tcgcgcgtgctcatcatggacgagcccaccgccgcgctcaacaacgaggaagtggccgac
ctgttccgcatcatcggccagctcaaatcgcagggcgtggccatcgtctacatctcgcac
aagatggatgagttgaagcgcattgccgaccgcgtgaccgtgatgcgcgacggccaatac
atcgccaccgtgtcgatggccgatacgccgatggattcgctcatcgccatgatggtgggc
cgccaactcaccgaggtggagaacgattttcccgacacctcggacaacgagatcgtgctg
gaggcccgcggcatcacgcgcggcgcgatggtgcgcgatgcgagtttcgtgctgcgccgg
ggcgagatcctgggctttgcggggctcatgggcgcgggccgcaccgagctcgcgcgcgcg
gtgttcggcgccgaccccatcgatgcaggcgaggtcttcgtgcgcggcaagcgggtgtcg
atcaggtcgcccgaggatgcggtgtcgcatggcatcggctatctctcggaagaccgcaag
catttcggcctggccaccggcatggatgtggaaaccaacatcgcgctgccgagcatgaag
aagttcgtgtcgatgggcgtcttcatcgaccaggcggccatcgaggcagccggcaagcgc
tacgtgaagcagctcaacatcaagacgccctcggtgcaccagcaggtgcggctgctctcg
ggcggcaaccagcagaagatcgtgatcgccaagtggctgctgcgcgactgcagcgtgctc
ttcttcgacgaacccacgcgcggcatcgacgtgggcgcgaaggccgagatctatcgcctg
ctcaacgagctggctgccgagggcaaggccatcgtgatcatctcttcggagttgcccgag
atattgcgcgtgagccaccgcgtgctggtgatgtgcgaaggccgcatcaccggcgaactg
acggggcgcgaagcctcgcaggaaaagatcatgcagctcgccacccggcgcgaagctgca
gccaccgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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