KEGG   Variovorax paradoxus EPS: Varpa_1560Help
Entry
Varpa_1560        CDS       T01392                                 

Definition
tryptophan synthase subunit beta
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
vpe  Variovorax paradoxus EPS
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:vpe00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Varpa_1560
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Varpa_1560
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Varpa_1560
Enzymes [BR:vpe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Varpa_1560
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1730946..1732232)
Genome map
AA seq 428 aa AA seqDB search
MQSNFQDYQQPDATGHFGNYGGTFASETLTHAINELRDAYAKFKDDPAFLAEFHYELKHF
VGRPSPIYHAARTSREMGGAQIYLKREDLNHTGAHKINNVIGQAMLARRMGKPRVIAETG
AGQHGVATATICARYGLECVVYMGSQDVKRQSPNVYRMNLLGATVVPVESGSKTLKDALN
EAMRDWVTNVENTFYIIGTVAGPHPYPTMVRDFQSVIGTECIEQMPAMLAADGITGEAEG
KQPDVVVACVGGGSNAIGIFHPYIPFAGTRLIGVEAAGEGLDSGKHAASILRGSPGVLHG
NRTYLLQNEDGQITETHSISAGLDYPGVGPEHAHLADIGRAEYVGITDVEALEAFHYLCR
TEGIIPALESSHAVAYALKLAKTMRPDQSILVNLSGRGDKDIGTVADLSGVDFYDRPSMR
GLSVKGGK
NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt
atgcaaagcaatttccaggattaccagcaacccgacgccaccggccacttcggcaactac
ggcggcaccttcgcaagcgaaacgctcacccacgcgatcaacgagctgcgcgacgcgtac
gccaagttcaaggacgatccggcgttcctcgccgaattccactacgagctgaagcacttc
gtcggccggccctcgccgatctatcacgctgcgcgcaccagccgcgaaatgggcggcgcg
cagatctacctcaagcgtgaagacctcaaccacactggcgcgcacaagatcaacaacgtg
atcggccaggcgatgctcgcgcggcgcatgggcaagcctcgcgtgatcgccgagaccggg
gccggccagcacggcgtggccaccgccacgatctgcgcgcgctacggcctggaatgcgtg
gtctacatgggcagccaggacgtgaagcgccagagccccaacgtctaccgcatgaacctg
ctcggcgcgaccgtggtgccggtcgaatcgggcagcaagacgctgaaggacgcgctcaac
gaggcgatgcgcgactgggtcaccaatgtggaaaacaccttctacatcatcggcaccgtg
gccggcccgcacccctacccgacgatggtgcgcgacttccagagcgtgatcggcaccgag
tgcatcgagcaaatgcccgccatgctggcggccgacggcatcaccggcgaagccgagggc
aagcagcccgacgtggtggtcgcctgcgtgggcggcggcagcaatgcgatcggcatcttc
catccctacattccgttcgccggcacccggctcatcggcgtggaagcggcgggcgaaggc
ctggacagcggcaagcacgcagcctccatcctgcgcggcagcccaggcgtgctgcacggc
aaccgcacctacctgctgcagaacgaggacggccagatcaccgagacgcacagcatcagc
gccggcctcgactaccccggcgtgggcccggagcacgcgcacctggccgacatcggccgt
gccgagtacgtcggcatcaccgacgtcgaggcgctcgaagccttccactacctgtgtcga
acggagggcatcattcccgcgctcgaatccagccacgccgtggcctatgcgctgaagctc
gcgaaaaccatgcgccccgaccagtcgatcctggtgaacctctcgggccgcggcgacaag
gacatcggcaccgtcgccgacctgtcgggcgtcgatttctacgaccgcccctcgatgcgc
ggcctgagcgtgaagggaggcaagtga

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