KEGG   Variovorax paradoxus EPS: Varpa_3278Help
Entry
Varpa_3278        CDS       T01392                                 

Definition
isocitrate dehydrogenase, NADP-dependent
Orthology
K00031  
isocitrate dehydrogenase [EC:1.1.1.42]
Organism
vpe  Variovorax paradoxus EPS
Pathway
Citrate cycle (TCA cycle)
Glutathione metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids
Module
Citrate cycle (TCA cycle, Krebs cycle)
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Class
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:vpe00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:vpe00480]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3532555..3533814)
Genome map
AA seq 419 aa AA seqDB search
MPSYQHIKVPAEGQKITVNADNSLNVPDQPIIPFIEGDGTGLDITPVMLKVVDAAVAKAY
GGKKKIHWMEVYAGEKSTKVYGPDVWLPEETLHAVRDYVVSIKGPLTTPVGGGIRSLNVA
LRQELDLYVCLRPIQYFEGVPSPVREPHKTNMVIFRENSEDIYAGIEFEAESDKAKKLIK
FLQDELGVKKIRFPNTSGIGVKPVSIEGTERLVRKAFQYAIDNDKPSVTIVHKGNIMKFT
EGGFRDWAYNLAAKEFGAELIDGGPWMKFKNPKTGKEITVKDSIADAFLQQILLRPAEYS
VIATLNLNGDYVSDALAAQVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDYVNPGSEI
LSAEMMLRHMGWIEAADLIISAMKKSIASKRVTYDFARLMEGATQVSCSGFGQVMIEHM
NT seq 1260 nt NT seq  +upstreamnt  +downstreamnt
atgcccagctatcagcacatcaaagtcccggccgaaggccagaagatcacggtcaacgcg
gacaactcgctgaatgtgcccgatcaaccgatcatccccttcatcgaaggtgacggtact
gggctggacatcacgccggtgatgctcaaggtggtggacgccgcagtggccaaggcctac
ggtggcaagaagaagatccactggatggaggtctatgccggcgagaagtcgaccaaggtg
tatggccccgacgtctggctccccgaggaaaccctgcacgccgtgcgcgactacgtcgtc
tccatcaaaggcccgctcaccacgcccgtcggcggcggcattcgctcgctgaacgtcgcg
ctgcgccaggaactcgacctctacgtgtgcctgcgccccatccagtatttcgaaggcgtc
cccagtccagtgcgcgagccgcacaagaccaacatggtcatcttccgtgagaactcggaa
gacatctatgccggcatcgaattcgaagccgaaagcgacaaggccaagaagctcatcaag
ttcctgcaggacgagctcggcgtcaagaagatccgcttccccaacacatccggcatcggc
gtgaagcccgtgtcgatcgaaggcaccgagcgcctcgtgcgcaaggcattccagtacgcc
atcgacaacgacaagcccagcgtgaccatcgtgcacaagggcaacatcatgaagttcacc
gaaggaggcttccgtgactgggcctacaacctggccgccaaggagttcggcgccgagctg
atcgacggcggcccgtggatgaagttcaagaacccgaagacgggcaaggaaatcaccgtc
aaggacagcattgccgatgcgttcctgcagcagatcctgctgcgccccgccgagtacagc
gtgatcgccacgctgaacctcaacggcgactatgtgtccgacgcgctggccgcacaggtc
ggcggcatcggcatcgctccgggcgcgaacctgagcgacaccgtcgcaatgttcgaggcc
acgcacggcaccgcgcccaagtacgccggcaaggactacgtgaaccccggctccgaaatc
ctctcggccgaaatgatgttgcgccacatgggctggatcgaagcggccgacctgatcatc
agcgcgatgaagaagtcgattgccagcaagcgggtgacctatgacttcgcgcgcctgatg
gaaggtgcgacgcaggtgagctgctcgggcttcgggcaggtaatgatcgagcacatgtaa

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