KEGG   Variovorax paradoxus EPS: Varpa_4663
Entry
Varpa_4663        CDS       T01392                                 
Name
(GenBank) tryptophanyl-tRNA synthetase
  KO
K01867  tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Varpa_4663
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vpe01007]
    Varpa_4663
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vpe03016]
    Varpa_4663
Enzymes [BR:vpe01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.2  tryptophan---tRNA ligase
     Varpa_4663
Amino acid related enzymes [BR:vpe01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   Varpa_4663
Transfer RNA biogenesis [BR:vpe03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Varpa_4663
 Prokaryotic type
    Varpa_4663
SSDB
Motif
Pfam: tRNA-synt_1b tRNA-synt_1f DUF1508
Other DBs
NCBI-ProteinID: ADU38826
UniProt: E6UXA9
Position
5082261..5083592
AA seq 443 aa
MALSSSAPLRVLTGITPSGTPHLGNYVGSIRHSVRQSVAPGVESFFFLADYHALIKVQDP
AVIQRSTLEIAASWLACGLDPERVTFYRQSDIAAIPELTWFLTCVTGKGVLNRAHAYKAQ
LDKNIAKGEDPDADVTAGLFMYPVLMGADILMFNAHKVPVGRDQVQHIEMARDMAQRFNH
QYGEHFTLPEAEIDDAVATLPGLDGRKMSKSYGNTIPLFASRAYLQKQIASIVTDSRAPG
EPKETEGSALFQIYQAFADADETEMLRKAYADGIGWGDAKQLLFERIEVEVAPLRKRYEA
LMSDPAEIERILLIGAEKASALSQPFMTRLRHAVGLRNLAAGRDKGNAKAAKVAKPSFKQ
YRERADGLFYFKLLDARGETLLQSRGFASPQEAGRTIALLQTERGAALATLAEQLEPIDT
EQSRAVNEALEALAEATTTTDGS
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggccttgtcttcttccgctccgctgcgcgtcctgaccgggatcaccccgtcgggcacg
ccccaccttggcaactacgtcggctcgatccgccactcggtgcggcagagcgtcgcgccc
ggtgtcgagagcttcttcttcctggctgactaccacgcgctcatcaaggtacaagacccg
gccgtgatccagcgctccacgctcgagatcgcagcaagctggctcgcgtgcgggctcgac
ccggagcgcgtgaccttctaccgccagtcggacatcgccgcgattcccgagctcacctgg
ttcctcacctgcgtcaccggcaagggcgtgctcaaccgcgcacatgcctacaaggcgcag
ctcgacaagaacatcgccaagggcgaggaccccgacgccgatgtgaccgccggcctcttc
atgtacccggtgctgatgggcgcggacatcctgatgttcaacgcccacaaggtccccgtg
ggccgcgaccaggtgcagcacatcgagatggcgcgcgacatggcgcagcgcttcaaccac
cagtacggagagcacttcacgctgcccgaagccgagatcgacgatgccgtcgccaccctg
cccggccttgacggccgcaagatgagcaagagctacggcaacacgatcccgctgttcgcg
tcgcgcgcgtacctgcaaaagcagatcgccagcatcgtgaccgactcgcgcgcgcccggc
gagcccaaggaaaccgagggctcggcgctcttccagatctaccaggcctttgccgatgcc
gacgagaccgagatgcttcgcaaggcctatgccgacggcatcggttggggcgacgccaag
caactgctgttcgagcggatcgaagtcgaagtcgcaccgctgcgaaagcgctacgaagcg
ctgatgagcgacccggcggagatcgagcgcatcctgctcatcggcgccgagaaggccagc
gcgctgtcgcagcccttcatgacgcgcctgcgccacgcggtgggcctgcgcaacctcgcg
gcgggccgcgacaagggcaacgccaaggctgccaaggtcgcgaagcccagcttcaagcag
taccgcgaacgcgccgacgggctcttctatttcaagctgctcgatgcgcgcggcgaaacc
ctgctgcagagccgtggatttgcttcgccgcaggaagccggccgtaccatcgcgctcctg
caaaccgagcgcggtgcggcactggcgacgctggccgagcagctcgagcccatcgacaca
gaacaatcacgcgccgtgaacgaggcgctggaggcattggcggaagcaacgaccaccaca
gatggaagttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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