KEGG   Variovorax paradoxus EPS: Varpa_4847Help
Entry
Varpa_4847        CDS       T01392                                 

Definition
pyridoxaL-5'-phosphate-dependent protein beta subunit
Orthology
K01733  
threonine synthase [EC:4.2.3.1]
Organism
vpe  Variovorax paradoxus EPS
Pathway
Glycine, serine and threonine metabolism
Vitamin B6 metabolism
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:vpe00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Varpa_4847
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Varpa_4847
  Metabolism of cofactors and vitamins
   00750 Vitamin B6 metabolism
    Varpa_4847
Enzymes [BR:vpe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.3  Acting on phosphates
    4.2.3.1  threonine synthase
     Varpa_4847
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5264982..5266130)
Genome map
AA seq 382 aa AA seqDB search
MTRQEPARYIDLRTGRYHDLSERRWRSDDGNPMMVTPLPGITRDDIDARERSVWRYRAAL
PVVIDQPASMGEGCTPLVQKRWGAFEPHFKLEWFNPTCSFKDRGASVMISFLRQLGVDAV
LEDSSGNGGAAIAAAGAAAGIKVKVLAPSYTPAPKVAQIRAFGAEVQLVPGPREESEYEA
VRQSESIFYASHNWHPFFLQGTKTLAYELWEDLGFVAPDNVVIPAGAGSNVLGCWIGFKE
LLAAGQIAKLPRIFVAQPLNCSPVDASFVAGVDTLVDRIVKPTIAEGTAIKRPVRLQEIL
QALRETNGKTVALTEEQIAAAVRRLASTGLYAEPTSATAAAAIDVLAERGDIRASETTVV
LLTGTGLKSTQFMTELFGGAAA
NT seq 1149 nt NT seq  +upstreamnt  +downstreamnt
atgacacgccaggaacccgcacgctatatcgatctccgcaccggccggtatcacgacctt
tcggaacgccgctggcgctccgacgacggcaatccgatgatggtgacgccgctgccgggc
atcacgcgcgacgacatcgatgcgcgcgagcgctcggtgtggcgctatcgcgcggcgctg
ccggtcgtgatcgaccagcccgcgagcatgggcgagggctgtacgccgcttgtgcagaag
cgctggggcgcattcgagccgcacttcaagctcgagtggttcaacccgacctgcagcttc
aaggaccgtggtgcgtccgtgatgatttcgttcctgcgccaactgggcgtcgacgcggtg
ctggaagacagctcgggcaacggcggcgcggccatcgccgcggcgggcgcggcggcgggc
atcaaggtgaaggtgctcgcgccgagctacacgccggcgcccaaggtggcgcagatccgc
gctttcggcgccgaggtgcaactggtgccgggaccgcgcgaggagtcggaatacgaggcg
gtgcgccagtcggaatcgatcttctatgcgagccacaactggcatccgttcttcctgcag
ggcacgaagacgctggcctatgaactctgggaagacctgggcttcgtcgcgcccgacaac
gtggtgattccggccggcgcgggcagtaatgtgctcgggtgctggatcggcttcaaggaa
ctgctggccgcggggcagatcgcgaagctgccgcggatcttcgtggcgcagccgttgaac
tgctcgccggtggatgcgagctttgtggcgggcgtggacacgctggttgatcgcatcgtg
aagccgacgatcgccgaaggcacggcgatcaagcggcctgtgcgcctgcaggaaatcctt
caggcgctgcgcgagacgaatggcaagacagtggcgctgaccgaagagcagatcgcggca
gcggtgcgccggttggcttcgacggggctctatgccgagccgacttccgcgacggcggct
gcggccatcgatgtgctggcggagcggggcgacatccgggcgagtgaaaccacggtcgtg
ctgctgacgggcaccggcctgaagtcgacgcagttcatgaccgagctcttcggcggcgct
gccgcctga

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