KEGG   Variovorax paradoxus EPS: Varpa_4850Help
Entry
Varpa_4850        CDS       T01392                                 

Definition
pyridoxaL-5'-phosphate-dependent protein beta subunit
Orthology
K01733  
threonine synthase [EC:4.2.3.1]
Organism
vpe  Variovorax paradoxus EPS
Pathway
Glycine, serine and threonine metabolism
Vitamin B6 metabolism
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Threonine biosynthesis, aspartate => homoserine => threonine
Brite
KEGG Orthology (KO) [BR:vpe00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Varpa_4850
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Varpa_4850
  Metabolism of cofactors and vitamins
   00750 Vitamin B6 metabolism
    Varpa_4850
Enzymes [BR:vpe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.3  Acting on phosphates
    4.2.3.1  threonine synthase
     Varpa_4850
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5267882..5269138)
Genome map
AA seq 418 aa AA seqDB search
MTPSPVLDFKFAALPADPSAHRSGNPAASALARTLKPVRNPRLRGLQCLRCDALYPVTLT
HDGCPACKRAGFHVALRASYLPDLGNQTERAEGHDAIPMPYASGFTLGEGQTPMLEMTEL
ARHFDVARLGLKDESSNPTGSHKDRMTAVGVAQALDFGAHTLVLASSGNAAVSAAHYAWA
AGLRCEVATYEGMPATYSRQLDALGARRYVFADNAGRWAFVRERSQYPGYFALTNYRLPA
LGSAPLAIEGYKTIAPECVADAGLPDHIVIPTARGDLAWGIYAGFRDLLAAGRIPRLPRL
WLVEPFPRLARVFAGGAINGSYPGHTAQFSTAGATVTYLQWQAASATGGGAVVVSDDEAR
AARRLLTAAGVSAELCAAGGLAALRQLRESGAIAADAHVVLMLTANASSDPSWPDPAV
NT seq 1257 nt NT seq  +upstreamnt  +downstreamnt
gtgacgccctcgccagttctggacttcaagttcgccgccttgccagcggacccctcggcc
catcgttcggggaatcccgccgcctccgccctggcccgcacgctcaagccggtgcgcaat
ccgcgcttgcggggcctgcagtgcctgcgctgcgatgcgctctacccggtcacgctgacg
cacgacggctgccccgcctgcaagcgcgcgggctttcacgtcgcattgcgcgcgagctac
ctgcccgacctggggaaccagacagagcgagcagaaggccacgatgcgatccccatgccc
tatgcgtcgggcttcaccctcggcgagggccagacgccgatgctggagatgacggagctt
gcgcggcatttcgacgtcgcgcggctcggcctcaaggacgaatcgagcaaccccaccggc
tcgcacaaggaccggatgacggcggtgggcgtggcgcaggcgctggacttcggcgcccac
acgctggtgctcgcatcgtcgggcaatgccgcggtgtcggcggcgcactacgcgtgggcg
gcgggcctgcgctgcgaggtcgcgacctacgaaggcatgccggcgacctattcgcgccag
ctcgatgcgctgggcgcgcggcgctatgtgttcgccgacaacgccggccgctgggccttc
gtgcgcgagcgctcgcagtaccccggctacttcgcgctgaccaactaccgtttgcctgcg
ctcggcagtgcgccgctggccatcgagggctacaagacgattgcgcccgagtgcgtggcc
gacgccggcctgccggaccacatcgtgattcccaccgcgcgcggcgacctcgcctggggc
atctacgcgggctttcgcgacctgctggccgcggggcgcattccgcgcctgccgcggctc
tggctggtggagccgtttccgcgcctcgcacgcgtgttcgcgggtggcgcgatcaacggc
agctatcccggccacaccgcgcagttctcgacggcgggcgccaccgtgacctacctgcag
tggcaggccgccagcgccacgggcggcggcgcggtggtggtgagcgacgacgaggcgcgt
gcggcgcggcggttgctcacggctgccggcgtgagcgccgaactgtgcgcggccggcggc
ctggccgcgctgcggcaactgcgcgagagcggtgccatcgccgccgacgcgcatgtggtg
ctgatgctcacggccaacgcgtcgagcgatccgagctggcccgatccggccgtctga

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