KEGG   Variovorax paradoxus EPS: Varpa_5196Help
Entry
Varpa_5196        CDS       T01392                                 

Definition
succinyL-CoA synthetase subunit beta (EC:6.2.1.5)
Orthology
K01903  
succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Organism
vpe  Variovorax paradoxus EPS
Pathway
Citrate cycle (TCA cycle)
Propanoate metabolism
C5-Branched dibasic acid metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Module
Citrate cycle (TCA cycle, Krebs cycle)
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:vpe00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Varpa_5196
  Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Varpa_5196
   00640 Propanoate metabolism
    Varpa_5196
   00660 C5-Branched dibasic acid metabolism
    Varpa_5196
Enzymes [BR:vpe01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     Varpa_5196
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5654531..5655703)
Genome map
AA seq 390 aa AA seqDB search
MNIHEYQGKDVLRKYGVTTPRGFACASADEAADAATRLGGRAWVVKAQIHAGGRGKGGGV
KLAWSVDEVRRHASQMLGMTLKTHQTGPEGRVVKRLLVEEGIEIDKEMYLALVVDRESGR
VALMASSEGGMDIEEVAARTPGKIHKVLIDPATGLKGSEADIVARSIGLSGKSVMQARTL
MQNLYQAFDASDASLAEINPLVVTRDGRVIALDAKFNFDSNALFRQPEIVAMRDFDEEDP
AELEASRFDLSYIALDGDIGCLVNGAGLAMATMDVIKLYGGSPANFLDVGGGATAEKVTQ
AFKLMLRNPNLRAILVNIFGGIMKCDVIARGVIAAAREVELSVPLVVRMKGTNESLGRTI
LAQSGLPIITADDMADAAREAVAAARRRSH
NT seq 1173 nt NT seq  +upstreamnt  +downstreamnt
atgaatatccacgaataccagggcaaggacgtattgcgcaaatacggcgtcactacgccc
cgcggattcgcctgcgcctcggccgacgaagccgccgacgccgccacccgcctgggcggc
cgcgcctgggtggtgaaggcgcagatccacgcgggtggccgcggcaagggcggcggcgtg
aagctcgcgtggtcggtcgacgaagtgcgccggcacgcgagccagatgctcggcatgacg
ctcaagacccaccagaccggccccgaaggccgcgtggtgaagcgtctcctggtggaagaa
ggcatcgagatcgacaaggagatgtacctcgccctggtggtcgatcgcgaatcgggccgc
gtggcgctgatggcgtcgagcgaaggcggcatggacatcgaggaggtggcagcgcgcacg
cccggcaagatccacaaggtgctcatcgatccggccacgggcctgaagggcagcgaggcc
gacatcgtggcgcgcagcatcggcctctcgggcaagtcggtgatgcaggcgcgcacgctg
atgcaaaacctgtatcaggcgttcgatgcgagcgatgcgtcgctcgccgagatcaacccg
ctggtcgtgacgcgcgacggccgcgtgatcgcgctcgatgccaagttcaacttcgattcg
aacgcactctttcgccaacccgagatcgtggcgatgcgcgacttcgatgaagaagacccg
gccgagctcgaggcctcgcgcttcgatctctcgtacatcgcgctcgatggcgacatcggc
tgcctcgtcaacggcgcgggcctggcgatggcgacgatggacgtgatcaagctctacggc
ggctcgcccgccaactttctcgacgtgggcggcggcgcgacggccgagaaagtgacgcag
gccttcaagctgatgctgcgcaacccgaacctgcgcgcgattctggtcaacatcttcggc
gggatcatgaagtgcgacgtgatcgcgcggggcgtgatcgcggcggcgcgcgaggtcgaa
ctctcggtgccgctcgtggtgcgcatgaagggcaccaacgagagcctgggccgcacgatc
ctcgcccaatcgggcctgccgatcatcacggccgacgacatggcggatgcggcccgagag
gccgtggccgcggcgcggcggaggagccactga

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