KEGG   Variovorax paradoxus EPS: Varpa_5196Help
Entry
Varpa_5196        CDS       T01392                                 

Definition
(RefSeq) succinyL-CoA synthetase subunit beta (EC:6.2.1.5)
  KO
K01903  
succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Organism
vpe  Variovorax paradoxus EPS
Pathway
Citrate cycle (TCA cycle)
Propanoate metabolism
C5-Branched dibasic acid metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Biosynthesis of antibiotics
Carbon metabolism
Module
Citrate cycle (TCA cycle, Krebs cycle)
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:vpe00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Varpa_5196
  Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Varpa_5196
   00640 Propanoate metabolism
    Varpa_5196
   00660 C5-Branched dibasic acid metabolism
    Varpa_5196
Enzymes [BR:vpe01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     Varpa_5196
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(5654531..5655703)
Genome map
AA seq 390 aa AA seqDB search
MNIHEYQGKDVLRKYGVTTPRGFACASADEAADAATRLGGRAWVVKAQIHAGGRGKGGGV
KLAWSVDEVRRHASQMLGMTLKTHQTGPEGRVVKRLLVEEGIEIDKEMYLALVVDRESGR
VALMASSEGGMDIEEVAARTPGKIHKVLIDPATGLKGSEADIVARSIGLSGKSVMQARTL
MQNLYQAFDASDASLAEINPLVVTRDGRVIALDAKFNFDSNALFRQPEIVAMRDFDEEDP
AELEASRFDLSYIALDGDIGCLVNGAGLAMATMDVIKLYGGSPANFLDVGGGATAEKVTQ
AFKLMLRNPNLRAILVNIFGGIMKCDVIARGVIAAAREVELSVPLVVRMKGTNESLGRTI
LAQSGLPIITADDMADAAREAVAAARRRSH
NT seq 1173 nt NT seq  +upstreamnt  +downstreamnt
atgaatatccacgaataccagggcaaggacgtattgcgcaaatacggcgtcactacgccc
cgcggattcgcctgcgcctcggccgacgaagccgccgacgccgccacccgcctgggcggc
cgcgcctgggtggtgaaggcgcagatccacgcgggtggccgcggcaagggcggcggcgtg
aagctcgcgtggtcggtcgacgaagtgcgccggcacgcgagccagatgctcggcatgacg
ctcaagacccaccagaccggccccgaaggccgcgtggtgaagcgtctcctggtggaagaa
ggcatcgagatcgacaaggagatgtacctcgccctggtggtcgatcgcgaatcgggccgc
gtggcgctgatggcgtcgagcgaaggcggcatggacatcgaggaggtggcagcgcgcacg
cccggcaagatccacaaggtgctcatcgatccggccacgggcctgaagggcagcgaggcc
gacatcgtggcgcgcagcatcggcctctcgggcaagtcggtgatgcaggcgcgcacgctg
atgcaaaacctgtatcaggcgttcgatgcgagcgatgcgtcgctcgccgagatcaacccg
ctggtcgtgacgcgcgacggccgcgtgatcgcgctcgatgccaagttcaacttcgattcg
aacgcactctttcgccaacccgagatcgtggcgatgcgcgacttcgatgaagaagacccg
gccgagctcgaggcctcgcgcttcgatctctcgtacatcgcgctcgatggcgacatcggc
tgcctcgtcaacggcgcgggcctggcgatggcgacgatggacgtgatcaagctctacggc
ggctcgcccgccaactttctcgacgtgggcggcggcgcgacggccgagaaagtgacgcag
gccttcaagctgatgctgcgcaacccgaacctgcgcgcgattctggtcaacatcttcggc
gggatcatgaagtgcgacgtgatcgcgcggggcgtgatcgcggcggcgcgcgaggtcgaa
ctctcggtgccgctcgtggtgcgcatgaagggcaccaacgagagcctgggccgcacgatc
ctcgcccaatcgggcctgccgatcatcacggccgacgacatggcggatgcggcccgagag
gccgtggccgcggcgcggcggaggagccactga

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