KEGG   Variovorax paradoxus EPS: Varpa_5311
Entry
Varpa_5311        CDS       T01392                                 
Name
(GenBank) ribosomal RNA methyltransferase RrmJ/FtsJ
  KO
K06442  23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Organism
vpe  Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vpe03009]
    Varpa_5311
Enzymes [BR:vpe01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.226  23S rRNA (cytidine1920-2'-O)-methyltransferase
     Varpa_5311
    2.1.1.227  16S rRNA (cytidine1409-2'-O)-methyltransferase
     Varpa_5311
Ribosome biogenesis [BR:vpe03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Varpa_5311
   23S rRNA modification factors
    Varpa_5311
SSDB
Motif
Pfam: FtsJ S4 Methyltransf_25 Methyltransf_23 Methyltransf_11
Other DBs
NCBI-ProteinID: ADU39467
UniProt: E6V798
Position
complement(5768303..5769139)
AA seq 278 aa
MRADQLLVERGLAASRSQAVRLIAGGMRWRDAGTSDAWRSVVKNKDEVPASAELELDDAA
EARYVSRGGLKLEGALNVSGVDPAGKLCLDVGQSTGGFTDCLLQRGATKVVGVDVGHGQL
HAKLREDERVVAIEGVNARALSPADLQVDDDEDAEAEDAAEVGEVVEAPAEPRFDLIVGD
LSFISLTLVLPAVVQFLADDGQLLMLVKPQFELQPGQVGKGGIVRDDAMYPVVEKRLHDA
CAALELKVLRWFDSPIAGGDGNREFFIHAVRASGANGS
NT seq 837 nt   +upstreamnt  +downstreamnt
atgcgcgctgatcaactgttggtggaacgcggcctcgccgcgtcgcgttcgcaggccgtg
cggctcattgccggcggcatgcgctggcgcgatgcgggcacgagcgacgcatggcgctcg
gtcgtgaagaacaaggacgaagtgcctgcatccgccgagctcgaactcgacgatgcggcc
gaggcgcggtacgtctcgcgcggcgggctcaagctggaaggcgcgctgaatgtgagcggt
gtcgatcccgccggcaagctgtgcctcgatgtgggccagtcgaccggcggcttcaccgat
tgcctgctgcaacgcggcgcgacgaaggtcgtgggcgtcgacgtcggccatgggcaactg
catgcgaagttgcgcgaggacgagcgcgtggtcgccatcgaaggcgtcaatgcgcgggcg
ttgtcgccggccgatctgcaggtggacgatgacgaggacgccgaggcggaagatgccgca
gaggttggcgaggtagtcgaggctccggccgagccgcgcttcgacctcatcgtcggcgac
ctgtcgttcatctcgctcactctggtgctgccggccgtggtgcagttcctggccgacgac
ggccagctgctgatgctggtcaagccgcagttcgaactgcagcccggccaggtcggcaag
ggcggcatcgtgcgcgacgacgcgatgtaccccgtcgtcgagaagcgcctgcacgatgca
tgcgcagcgcttgagctgaaggtgctgcgctggttcgacagcccgatcgccggcggcgac
ggcaaccgcgagtttttcattcacgccgtgcgcgcgtccggcgcgaacggttcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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