KEGG   Variovorax paradoxus EPS: Varpa_5605Help
Entry
Varpa_5605        CDS       T01392                                 

Definition
porphobilinogen synthase (EC:4.2.1.24)
Orthology
K01698  
porphobilinogen synthase [EC:4.2.1.24]
Organism
vpe  Variovorax paradoxus EPS
Pathway
Porphyrin and chlorophyll metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:vpe00001]
 Metabolism
  Metabolism of cofactors and vitamins
   00860 Porphyrin and chlorophyll metabolism
    Varpa_5605
Enzymes [BR:vpe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.24  porphobilinogen synthase
     Varpa_5605
Exosome [BR:vpe04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Varpa_5605
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
6092216..6093229
Genome map
AA seq 337 aa AA seqDB search
MTRPHSPLAMFPAGRPRRLRRDAFTRNLVRENTLTVNDLIYPVFVQEGEKRLDAVSSMPG
VERLSLDLLLPIAEQCVAAGIPVMALFPVIDASLKTPAGDEAFNPDGLIPRVVAALKSRF
PELGVMTDVALDPYTSHGQDGLLDDNGYIVNDATVEVLVKQALTQSQAGVDIVAPSDMMD
GRIGAVRTALEARGDIHTRIMAYSAKYASAFYGPFRDAVGSAATLGKSNKKVYQMDPGNS
DEALREVALDIAEGADMVMVKPGMPYLDIVRRVKDEFHVPTFAYQVSGEYAMLKAAAQNG
WLDHDAVVLESLLAFKRAGADGVLTYFALDAARLLQS
NT seq 1014 nt NT seq  +upstreamnt  +downstreamnt
atgacgcgccctcactccccccttgccatgttccccgccggccgtccaaggcgcctgcgc
cgggacgcctttacccgcaacctggtgcgcgagaacacgctgacggtcaacgacctgatc
tatccggtgttcgtgcaggaaggcgaaaagcggctcgatgccgtctcctccatgcccggc
gtggagcgcctgagtctcgacttgcttttgccgattgccgagcaatgcgtggcggcgggc
atcccggtgatggcgctgtttccggtgatcgacgcgagcctcaagacaccggccggcgac
gaagcgttcaaccccgacgggctgattccccgggtggtcgccgccctcaagtcgcgcttc
cccgaactcggcgtgatgactgacgtggcgctcgacccctacaccagccacgggcaggac
ggcctcctcgacgacaacggctacatcgtcaacgacgcaaccgtcgaagtgctggtgaag
caggcactcacacaatcgcaagctggcgtggacattgtggcgcccagcgacatgatggac
ggccgtatcggagccgtccgcaccgccctggaagcccgcggcgacattcacacgcgcatc
atggcctacagcgccaagtacgccagcgccttctacggccccttccgcgatgccgtcggc
tcggccgccacgctcggcaagagcaataaaaaggtctaccagatggacccgggcaacagc
gacgaagcgctacgcgaggtggctctggacatcgccgaaggcgccgatatggtgatggtc
aagcccggcatgccctacctggacatcgtgcgccgcgtgaaggatgagttccatgtgccg
accttcgcctaccaggtgagcggcgagtacgcgatgctcaaggccgccgcacagaacggc
tggctcgatcacgacgccgtcgtgctcgaaagcctgctggccttcaagcgggccggtgcc
gatggcgtgctcacgtactttgcccttgacgccgcgcgcctgctacaaagttaa

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